Transcript Information: R_Transcript_59540.p3


Annotated TAIR IDAT5G55060.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22342079-22346400 | Forward length=662
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7179257369147
Replicate 20.98806119606109
Replicate 30.26949103054297
Condition 2: 8 Hour
Replicate 12.8806899937935
Replicate 23.1568303775791
Replicate 31.0677418011992
Condition 3: 24 Hour
Replicate 11.6205510984262
Replicate 21.5568418040407
Replicate 32.5750240808114


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59540.p3 GENE.R_Transcript_59540~~R_Transcript_59540.p3 ORF type:complete len:85 (+),score=4.49 R_Transcript_59540:254-508(+)
ATGGAGGGAGAGTCGATAGTTTCCAAGGCAAGGACGGCATTTCATTCAGCGGCTGCTAAAGCCGAAAGAGTTTTCATCGATTTTAAATCCGATCTTCGAGGTAGTCCTCATTTTTCTCTCTCCTCCTATTATCAAAACCTGCATTTTCGCTTTTCTTTTTCTTTTTCTATATTTTCTCCTCAGATAAAGATAGCATACTTGAATAAACCACCAGAACTTTGCCTTTTATTGCCTTTTTTTTCTTTTTGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59540.p3 GENE.R_Transcript_59540~~R_Transcript_59540.p3 ORF type:complete len:85 (+),score=4.49 R_Transcript_59540:254-508(+)
MEGESIVSKARTAFHSAAAKAERVFIDFKSDLRGSPHFSLSSYYQNLHFRFSFSFSIFSPQIKIAYLNKPPELCLLLPFFSFCF*

Click here to download the sequence:
Link to NCBI Protein BLAST