Transcript Information: R_Transcript_59604.p1


Annotated TAIR IDAT1G78770.1
Annotated Gene Nameanaphase promoting complex 6
Annotated Gene Symbol(s)APC6
Annotation TypeOrtholog
Chromosome Positionchr1:29617421-29621273 | Forward length=543
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.53514875374
Replicate 213.161283900657
Replicate 314.864114653386
Condition 2: 8 Hour
Replicate 111.792824662092
Replicate 210.193931427599
Replicate 314.481248178765
Condition 3: 24 Hour
Replicate 114.855051735573
Replicate 214.676477423509
Replicate 316.737656525274


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59604.p1 GENE.R_Transcript_59604~~R_Transcript_59604.p1 ORF type:complete len:544 (+),score=87.19,TPR_2|PF07719.13|3.9e+03,TPR_2|PF07719.13|5.7e+02,TPR_2|PF07719.13|0.0006,TPR_2|PF07719.13|0.96,TPR_2|PF07719.13|0.0045,TPR_2|PF07719.13|0.59,TPR_2|PF07719.13|8.4e+02,TPR_2|PF07719.13|9.9e-05,TPR_2|PF07719.13|0.00042,TPR_2|PF07719.13|0.0079,TPR_1|PF00515.24|1.2e+03,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|50,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.2,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|0.0001,TPR_1|PF00515.24|1.7e-06,TPR_1|PF00515.24|1.3e-05,ANAPC3|PF12895.3|7.7e-18,ANAPC3|PF12895.3|4.4e+03,ANAPC3|PF12895.3|0.15,ANAPC3|PF12895.3|6e+02,ANAPC3|PF12895.3|0.0016,ANAPC3|PF12895.3|0.00028,TPR_11|PF13414.2|2.3e+02,TPR_11|PF13414.2|0.019,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|2.9,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|0.037,TPR_11|PF13414.2|3.6e-12,TPR_11|PF13414.2|1.4e-08,TPR_12|PF13424.2|4.3e+02,TPR_12|PF13424.2|49,TPR_12|PF13424.2|4.8e+02,TPR_12|PF13424.2|0.077,TPR_12|PF13424.2|80,TPR_12|PF13424.2|0.00028,TPR_12|PF13424.2|2.9e-10,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|0.0082,TPR_8|PF13181.2|5.5e+03,TPR_8|PF13181.2|25,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|17,TPR_8|PF13181.2|0.22,TPR_8|PF13181.2|1.7e-05,TPR_8|PF13181.2|0.086,TPR_7|PF13176.2|4.7,TPR_7|PF13176.2|2.5e+03,TPR_7|PF13176.2|1.2e+04,TPR_7|PF13176.2|7.9,TPR_7|PF13176.2|7.2e-05,TPR_7|PF13176.2|0.012,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|0.75,TPR_16|PF13432.2|2.4e+02,TPR_16|PF13432.2|0.77,TPR_16|PF13432.2|0.25,TPR_16|PF13432.2|0.0018,TPR_14|PF13428.2|3.4e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|10,TPR_14|PF13428.2|5,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|1,TPR_14|PF13428.2|78,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|1.7e+03,TPR_10|PF13374.2|2.3e+03,TPR_10|PF13374.2|9.5e+03,TPR_10|PF13374.2|0.0056,TPR_10|PF13374.2|0.46,TPR_10|PF13374.2|0.19,TPR_19|PF14559.2|1.8,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.1e+03,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|0.23 R_Transcript_59604:164-1795(+)
ATGAGGGAAGAAGAGATAGAGAAGTTGAGGGGGGTGGTGAGAGACTGTGTGAGCAAACACTTATACTCATCAGCCATTTTTTTTGCAGACAAAGTTGCGGCTTGCACAGGTGACCCAGCCGATATTTATATGCAGGCACAAGCCCTGTTTCTTGGCCGTCACTTTCGTCGTGCCTTTCATCTCCTCAATGCTTCTCAGATTGTTCTCCGTGACCTCCGTTTTCGCTATCTCGCCGCTAAATGCCTGGAGGAGTTAAAAGAGTGGGATCAGTGTTTACAAATGTTGGGAGATGCTAAAGTGGATGAACATTGTAATGTTAGTGACTCAAAAGATGTCAACATTATGTACCTAGATAAGGAAGGGGAAGATCGAGAAATCAATATATCTGCAGCGATTTGTTTTCTCAGGGGCAGGGCATATGAGGCATTGGAAAATCGTGTCCAGGCACGTCAATGGTACAAAGCTGCTATCAAAGCTGATCCTCTATGTTATGAGGCTCTGGAGCATCTCATTGAGAATCACATGCTTACATGTGAGGAAGAATCGTCTCTACTGTCGTCACTCCACTTTTCTCGTGAAGACAACTGGCTTTCTTCGTTTTACTCTTGTTTGATAAAGAAGCATGAGAAAGATAATGTAGTTGAAGCCAAATTTAAAGATCTCGAGAAAGAAAGTACGGTGACAGATTCATCATTCACGGGAACATTGAAGAATAACACAGATCTTTTGGCCTGTAAAGCTGAATACTATCATCAGTGTGGTGAATATCAGAAGTGCTTTGAACTAACTTCTCAATTGCTTGAGAAAGATCCTTTCCATCTGAAATGTACTTTGGTACATCTAGCTGCTGCCATGGAGCTTGGCCAGTCAAATGAGCTTTATATTATGGCTTGCAATTTGGTCAAGGATTACCCTCAAAGGGCTTTGTCATGGTTTGCTGTAGGGTGCTACTACTATTGCATCAAGAAGTATGACCAATCACGTCGATATTTTAGCAAGGCTACAAATCTAGAAGGAACATTTTTAGCGGCTTGGATGGGTCAGGGGAATGCATTTGCAGCATTAGAAGAAGGTGACCAGGCAATGTTGTCTTATCGCACTGCTGCCCGTCTGTTTCCTGGGTGTCATTTGCCAACCTTGTATATCGGCATGGAATACATGCGAACACACAGCTTCAAACTTGCAGAGCAGTTTTTCATGCAGGCGAAGACAAGTTGCTCTTCTGATCCACTAGTGTATAATGAACTGGGAGTTGTTGCATATCACATGAAGGAGTACAAAAAGGCAGTTCGATGGTTTGAGAAAACATTGGCAATCATCCCAACGTCTATCAATGAAACGTGGGAATGCACTGTTGTCAATCTCGCTCATGCATTTAGAAAACTAAAGATGTACCGTGAAGCCATCACATACTATGAGAAAGCACTTACCTTATCAACCAGGAGTTTAAGCACTTATGCAGGCCTTGGATACGCTTACCATTTACAGGGCAATTATAGTGCTGCAATTGCAAACTATCACAAGGCACTATGGCTGAAACTTGATGATCAGTTCTGCACAGAGATGTTAACTTCGGCACTAGCAGAGGAGAGTCGTTGTGATATCGACTCTATTCCAGGATTATTATCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59604.p1 GENE.R_Transcript_59604~~R_Transcript_59604.p1 ORF type:complete len:544 (+),score=87.19,TPR_2|PF07719.13|3.9e+03,TPR_2|PF07719.13|5.7e+02,TPR_2|PF07719.13|0.0006,TPR_2|PF07719.13|0.96,TPR_2|PF07719.13|0.0045,TPR_2|PF07719.13|0.59,TPR_2|PF07719.13|8.4e+02,TPR_2|PF07719.13|9.9e-05,TPR_2|PF07719.13|0.00042,TPR_2|PF07719.13|0.0079,TPR_1|PF00515.24|1.2e+03,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|50,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.2,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|0.0001,TPR_1|PF00515.24|1.7e-06,TPR_1|PF00515.24|1.3e-05,ANAPC3|PF12895.3|7.7e-18,ANAPC3|PF12895.3|4.4e+03,ANAPC3|PF12895.3|0.15,ANAPC3|PF12895.3|6e+02,ANAPC3|PF12895.3|0.0016,ANAPC3|PF12895.3|0.00028,TPR_11|PF13414.2|2.3e+02,TPR_11|PF13414.2|0.019,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|2.9,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|0.037,TPR_11|PF13414.2|3.6e-12,TPR_11|PF13414.2|1.4e-08,TPR_12|PF13424.2|4.3e+02,TPR_12|PF13424.2|49,TPR_12|PF13424.2|4.8e+02,TPR_12|PF13424.2|0.077,TPR_12|PF13424.2|80,TPR_12|PF13424.2|0.00028,TPR_12|PF13424.2|2.9e-10,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|0.0082,TPR_8|PF13181.2|5.5e+03,TPR_8|PF13181.2|25,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|17,TPR_8|PF13181.2|0.22,TPR_8|PF13181.2|1.7e-05,TPR_8|PF13181.2|0.086,TPR_7|PF13176.2|4.7,TPR_7|PF13176.2|2.5e+03,TPR_7|PF13176.2|1.2e+04,TPR_7|PF13176.2|7.9,TPR_7|PF13176.2|7.2e-05,TPR_7|PF13176.2|0.012,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|0.75,TPR_16|PF13432.2|2.4e+02,TPR_16|PF13432.2|0.77,TPR_16|PF13432.2|0.25,TPR_16|PF13432.2|0.0018,TPR_14|PF13428.2|3.4e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|10,TPR_14|PF13428.2|5,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|1,TPR_14|PF13428.2|78,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|1.7e+03,TPR_10|PF13374.2|2.3e+03,TPR_10|PF13374.2|9.5e+03,TPR_10|PF13374.2|0.0056,TPR_10|PF13374.2|0.46,TPR_10|PF13374.2|0.19,TPR_19|PF14559.2|1.8,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.1e+03,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|0.23 R_Transcript_59604:164-1795(+)
MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAACTGDPADIYMQAQALFLGRHFRRAFHLLNASQIVLRDLRFRYLAAKCLEELKEWDQCLQMLGDAKVDEHCNVSDSKDVNIMYLDKEGEDREINISAAICFLRGRAYEALENRVQARQWYKAAIKADPLCYEALEHLIENHMLTCEEESSLLSSLHFSREDNWLSSFYSCLIKKHEKDNVVEAKFKDLEKESTVTDSSFTGTLKNNTDLLACKAEYYHQCGEYQKCFELTSQLLEKDPFHLKCTLVHLAAAMELGQSNELYIMACNLVKDYPQRALSWFAVGCYYYCIKKYDQSRRYFSKATNLEGTFLAAWMGQGNAFAALEEGDQAMLSYRTAARLFPGCHLPTLYIGMEYMRTHSFKLAEQFFMQAKTSCSSDPLVYNELGVVAYHMKEYKKAVRWFEKTLAIIPTSINETWECTVVNLAHAFRKLKMYREAITYYEKALTLSTRSLSTYAGLGYAYHLQGNYSAAIANYHKALWLKLDDQFCTEMLTSALAEESRCDIDSIPGLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST