Transcript Information: R_Transcript_59609.p1


Annotated TAIR IDAT1G78770.1
Annotated Gene Nameanaphase promoting complex 6
Annotated Gene Symbol(s)APC6
Annotation TypeOrtholog
Chromosome Positionchr1:29617421-29621273 | Forward length=543
E-Value1.3E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.503444297609
Replicate 20.98420158201397
Replicate 31.2328278914596
Condition 2: 8 Hour
Replicate 11.7854276524033
Replicate 21.979869746355
Replicate 30.85085674783064
Condition 3: 24 Hour
Replicate 12.3914382528858
Replicate 20.38290380018363
Replicate 31.6339779540566


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59609.p1 GENE.R_Transcript_59609~~R_Transcript_59609.p1 ORF type:complete len:576 (+),score=93.11,TPR_2|PF07719.13|4.2e+03,TPR_2|PF07719.13|6.1e+02,TPR_2|PF07719.13|0.00064,TPR_2|PF07719.13|1,TPR_2|PF07719.13|0.0049,TPR_2|PF07719.13|0.81,TPR_2|PF07719.13|0.00011,TPR_2|PF07719.13|0.00045,TPR_2|PF07719.13|0.0084,TPR_1|PF00515.24|1.3e+03,TPR_1|PF00515.24|0.14,TPR_1|PF00515.24|53,TPR_1|PF00515.24|1.6,TPR_1|PF00515.24|0.31,TPR_1|PF00515.24|0.00011,TPR_1|PF00515.24|1.8e-06,TPR_1|PF00515.24|1.4e-05,ANAPC3|PF12895.3|8.4e-18,ANAPC3|PF12895.3|5.1e+03,ANAPC3|PF12895.3|7.4,ANAPC3|PF12895.3|7e+02,ANAPC3|PF12895.3|0.003,ANAPC3|PF12895.3|0.0003,TPR_11|PF13414.2|2.6e+02,TPR_11|PF13414.2|0.02,TPR_11|PF13414.2|4.6e+02,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|3.9e-12,TPR_11|PF13414.2|1.6e-08,TPR_12|PF13424.2|4.6e+02,TPR_12|PF13424.2|53,TPR_12|PF13424.2|5.3e+02,TPR_12|PF13424.2|0.079,TPR_12|PF13424.2|2.4e+03,TPR_12|PF13424.2|0.0086,TPR_12|PF13424.2|5.2e-10,TPR_8|PF13181.2|6.6e+02,TPR_8|PF13181.2|0.0088,TPR_8|PF13181.2|5.9e+03,TPR_8|PF13181.2|27,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|0.24,TPR_8|PF13181.2|1.8e-05,TPR_8|PF13181.2|0.092,TPR_7|PF13176.2|5.1,TPR_7|PF13176.2|2.6e+03,TPR_7|PF13176.2|1.2e+04,TPR_7|PF13176.2|8.5,TPR_7|PF13176.2|7.7e-05,TPR_7|PF13176.2|0.013,TPR_16|PF13432.2|3e+02,TPR_16|PF13432.2|0.8,TPR_16|PF13432.2|2.3e+02,TPR_16|PF13432.2|0.7,TPR_16|PF13432.2|0.48,TPR_16|PF13432.2|0.002,TPR_14|PF13428.2|3.7e+03,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|0.12,TPR_14|PF13428.2|11,TPR_14|PF13428.2|6.7,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|92,TPR_10|PF13374.2|1.3e+03,TPR_10|PF13374.2|1.8e+03,TPR_10|PF13374.2|2.4e+03,TPR_10|PF13374.2|1.2e+04,TPR_10|PF13374.2|0.006,TPR_10|PF13374.2|0.49,TPR_10|PF13374.2|0.2 R_Transcript_59609:164-1891(+)
ATGAGGGAAGAAGAGATAGAGAAGTTGAGGGGGGTGGTGAGAGACTGTGTGAGCAAACACTTATACTCATCAGCCATTTTTTTTGCAGACAAAGTTGCGGCTTGCACAGGTGACCCAGCCGATATTTATATGCAGGCACAAGCCCTGTTTCTTGGCCGTCACTTTCGTCGTGCCTTTCATCTCCTCAATGCTTCTCAGATTGTTCTCCGTGACCTCCGTTTTCGCTATCTCGCCGCTAAATGCCTGGAGGAGTTAAAAGAGTGGGATCAGTGTTTACAAATGTTGGGAGATGCTAAAGTGGATGAACATTGTAATGTTAGTGACTCAAAAGATGTCAACATTATGTACCTAGATAAGGAAGGGGAAGATCGAGAAATCAATATATCTGCAGCGATTTGTTTTCTCAGGGGCAGGGCATATGAGGCATTGGAAAATCGTGTCCAGGCACGTCAATGGTACAAAGCTGCTATCAAAGCTGATCCTCTATGTTATGAGGCTCTGGAGCATCTCATTGAGAATCACATGCTTACATGTGAGGAAGAATCGTCTCTACTGTCGTCACTCCACTTTTCTCGTGAAGACAACTGGCTTTCTTCGTTTTACTCTTGTTTGATAAAGAAGCATGAGAAAGATAATGTAGTTGAAGCCAAATTTAAAGATCTCGAGAAAGAAAGTACGGTGACAGATTCATCATTCACGGGAACATTGAAGAATAACACAGATCTTTTGGCCTGTAAAGCTGAATACTATCATCAGTGTGGTGAATATCAGAAGTGCTTTGAACTAACTTCTCAATTGCTTGAGAAAGATCCTTTCCATCTGAAATGTACTTTGGTACATCTAGCTGCTGCCATGGAGCTTGGCCAGTCAAATGAGCTTTATATTATGGCTTGCAATTTGGTCAAGGATTACCCTCAAAGGGCTTTGTCATGGTTTGCTGTAGGGTGCTACTACTATTGCATCAAGAAGTATGACCAATCACGTCGATATTTTAGCAAGGCTACAAATCTAGAAGGAACATTTTTAGCGGCTTGGATGGGTCAGGGGAATGCATTTGCAGCATTAGAAGAAGGTGACCAGGCAATGTTGTCTTATCGCACTGCTGCCCGTCTGTTTCCTGGGTTGAATCTTGATATTCTCTTCTTCCAGGTGTCATTTGCCAACCTTGTATATCGGCATGGAATACATGCGAACACACAGCTTCAAACTTGCAGAGCAGGAAAGGACATATACCTTGGTGATAAAGATAGTAATGTCAAGCTTTTAAAGCAGCCCTCCAAATATTGGTTTTTCATGCAGGCGAAGACAAGTTGCTCTTCTGATCCACTAGTGTATAATGAACTGGGAGTTGTTGCATATCACATGAAGGAGTACAAAAAGGCAGTTCGATGGTTTGAGAAAACATTGGCAATCATCCCAACGTCTATCAATGAAACGTGGGAATGCACTGTTGTCAATCTCGCTCATGCATTTAGAAAACTAAAGATGTACCGTGAAGCCATCACATACTATGAGAAAGCACTTACCTTATCAACCAGGAGTTTAAGCACTTATGCAGGCCTTGGATACGCTTACCATTTACAGGGCAATTATAGTGCTGCAATTGCAAACTATCACAAGGCACTATGGCTGAAACTTGATGATCAGTTCTGCACAGAGATGTTAACTTCGGCACTAGCAGAGGAGAGTCGTTGTGATATCGACTCTATTCCAGGATTATTATCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59609.p1 GENE.R_Transcript_59609~~R_Transcript_59609.p1 ORF type:complete len:576 (+),score=93.11,TPR_2|PF07719.13|4.2e+03,TPR_2|PF07719.13|6.1e+02,TPR_2|PF07719.13|0.00064,TPR_2|PF07719.13|1,TPR_2|PF07719.13|0.0049,TPR_2|PF07719.13|0.81,TPR_2|PF07719.13|0.00011,TPR_2|PF07719.13|0.00045,TPR_2|PF07719.13|0.0084,TPR_1|PF00515.24|1.3e+03,TPR_1|PF00515.24|0.14,TPR_1|PF00515.24|53,TPR_1|PF00515.24|1.6,TPR_1|PF00515.24|0.31,TPR_1|PF00515.24|0.00011,TPR_1|PF00515.24|1.8e-06,TPR_1|PF00515.24|1.4e-05,ANAPC3|PF12895.3|8.4e-18,ANAPC3|PF12895.3|5.1e+03,ANAPC3|PF12895.3|7.4,ANAPC3|PF12895.3|7e+02,ANAPC3|PF12895.3|0.003,ANAPC3|PF12895.3|0.0003,TPR_11|PF13414.2|2.6e+02,TPR_11|PF13414.2|0.02,TPR_11|PF13414.2|4.6e+02,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|3.9e-12,TPR_11|PF13414.2|1.6e-08,TPR_12|PF13424.2|4.6e+02,TPR_12|PF13424.2|53,TPR_12|PF13424.2|5.3e+02,TPR_12|PF13424.2|0.079,TPR_12|PF13424.2|2.4e+03,TPR_12|PF13424.2|0.0086,TPR_12|PF13424.2|5.2e-10,TPR_8|PF13181.2|6.6e+02,TPR_8|PF13181.2|0.0088,TPR_8|PF13181.2|5.9e+03,TPR_8|PF13181.2|27,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|0.24,TPR_8|PF13181.2|1.8e-05,TPR_8|PF13181.2|0.092,TPR_7|PF13176.2|5.1,TPR_7|PF13176.2|2.6e+03,TPR_7|PF13176.2|1.2e+04,TPR_7|PF13176.2|8.5,TPR_7|PF13176.2|7.7e-05,TPR_7|PF13176.2|0.013,TPR_16|PF13432.2|3e+02,TPR_16|PF13432.2|0.8,TPR_16|PF13432.2|2.3e+02,TPR_16|PF13432.2|0.7,TPR_16|PF13432.2|0.48,TPR_16|PF13432.2|0.002,TPR_14|PF13428.2|3.7e+03,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|0.12,TPR_14|PF13428.2|11,TPR_14|PF13428.2|6.7,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|92,TPR_10|PF13374.2|1.3e+03,TPR_10|PF13374.2|1.8e+03,TPR_10|PF13374.2|2.4e+03,TPR_10|PF13374.2|1.2e+04,TPR_10|PF13374.2|0.006,TPR_10|PF13374.2|0.49,TPR_10|PF13374.2|0.2 R_Transcript_59609:164-1891(+)
MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAACTGDPADIYMQAQALFLGRHFRRAFHLLNASQIVLRDLRFRYLAAKCLEELKEWDQCLQMLGDAKVDEHCNVSDSKDVNIMYLDKEGEDREINISAAICFLRGRAYEALENRVQARQWYKAAIKADPLCYEALEHLIENHMLTCEEESSLLSSLHFSREDNWLSSFYSCLIKKHEKDNVVEAKFKDLEKESTVTDSSFTGTLKNNTDLLACKAEYYHQCGEYQKCFELTSQLLEKDPFHLKCTLVHLAAAMELGQSNELYIMACNLVKDYPQRALSWFAVGCYYYCIKKYDQSRRYFSKATNLEGTFLAAWMGQGNAFAALEEGDQAMLSYRTAARLFPGLNLDILFFQVSFANLVYRHGIHANTQLQTCRAGKDIYLGDKDSNVKLLKQPSKYWFFMQAKTSCSSDPLVYNELGVVAYHMKEYKKAVRWFEKTLAIIPTSINETWECTVVNLAHAFRKLKMYREAITYYEKALTLSTRSLSTYAGLGYAYHLQGNYSAAIANYHKALWLKLDDQFCTEMLTSALAEESRCDIDSIPGLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST