Transcript Information: R_Transcript_5964.p1


Annotated TAIR IDAT1G13260.1
Annotated Gene Namerelated to ABI3/VP1 1
Annotated Gene Symbol(s)RAV1, EDF4
Annotation TypeOrtholog
Chromosome Positionchr1:4542386-4543420 | Forward length=344
E-Value3.1E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.907757106956
Replicate 249.965252641615
Replicate 353.701172572112
Condition 2: 8 Hour
Replicate 161.734409501427
Replicate 287.80865156975
Replicate 374.746962601877
Condition 3: 24 Hour
Replicate 154.037480219926
Replicate 244.630688981404
Replicate 345.065957999201


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5964.p1 GENE.R_Transcript_5964~~R_Transcript_5964.p1 ORF type:complete len:424 (+),score=45.39,B3|PF02362.17|4.4e-28,AP2|PF00847.16|7.8e-09 R_Transcript_5964:92-1273(+)
ATGGAGGCAAGCAGTATAGATGAAAGCTCCTCTACAAGTGATTCTCAGTCAACTCTACCCTCTCTCCCGGTCAACCCGAAAATTCTGTCCATTCCGGTGGCCGGAAAGTCGACTCCGGGGAGCCTCTGCCGGATGGGGAGCGGTACGAGTGTGATCACCGACTCGGAGAATGGGATCGAGGCCGAGTCAAGGAAGTTGCCGTCGTCTAAGTATAAGGGGGTGGTTCCTCAGCCTAATGGCCGCTGGGGTGCCCAAATCTATGAAAAACACCAGCGCGTGTGGCTTGGCACCTTCAATGAGGAAGACGAGGCGGCGCGTGCTTATGACGTCGCCGCTCAACGCTTCCGTGGCCGCGACGCCGTCACCAACTTCAAGCCACTCTCGGCTGAAGAAGGCGACGGCGCCTCCGAGCTCCGGTTCCTCAACTTCCGATCCAAGGCCGAGATTGTCGACATGCTTAGGAAACACACTTACCACGACGAGCTCCTCCAGAGCAAGCGTAACTTCAAGAACAATAATAACAACAACAACAGAAATAATGATAATGATTATAATAGTCTCTATAAGTCCAACGTCCTTAGCGGGGCTAAGTACGTTGGACGGATGGGGCCCAGCCGGGAGCAGCTTTTCGAGAAAACCGTCACACCCAGTGATGTCGGAAAGCTGAACCGGCTGGTCATCCCCAAGCAGCACGCCGAGAAGCACTTCCCGCTCCAGGGCGGCGGGAACGGAAGCGGGAGCGGGACGTGCTCCTCCACTTCAACGAAGGGCGTGCTGCTCAACTTTGAGGACGTCAACGAGAAGGTCTGGCGGTTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTCACAAAAGGGTGGAGCAGGTTCGTCAAGGAGAAGAATCTCAAGGCCGGAGATGTCGTCATTTTTCAGAGATCTACTGGGCCTGATCAGCAGCTTTACATTGACTGGAAGCCAAGGGGTATCACCACTACCGCAGCCAATGGGCCCGAGCATGGGCTGGGCCGGATTGTTTTTCCTCAGGTGGAGGTCCCGCCGGCTCAAATGCTCCGGTTGTTTGGAGTGGATATATGTAGAATTGCTGACGCCGGCAATGGCAAGAGGTTGAGGGAAGTGGAGCTTTTGTCTATGGAGCCTAATAGTAAGAAGCAGATGGTTGTTGCTGCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5964.p1 GENE.R_Transcript_5964~~R_Transcript_5964.p1 ORF type:complete len:424 (+),score=45.39,B3|PF02362.17|4.4e-28,AP2|PF00847.16|7.8e-09 R_Transcript_5964:92-1273(+)
MEASSIDESSSTSDSQSTLPSLPVNPKILSIPVAGKSTPGSLCRMGSGTSVITDSENGIEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSAEEGDGASELRFLNFRSKAEIVDMLRKHTYHDELLQSKRNFKNNNNNNNRNNDNDYNSLYKSNVLSGAKYVGRMGPSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQGGGNGSGSGTCSSTSTKGVLLNFEDVNEKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDVVIFQRSTGPDQQLYIDWKPRGITTTAANGPEHGLGRIVFPQVEVPPAQMLRLFGVDICRIADAGNGKRLREVELLSMEPNSKKQMVVAAL*

Click here to download the sequence:
Link to NCBI Protein BLAST