Transcript Information: R_Transcript_5965.p1


Annotated TAIR IDAT1G13260.1
Annotated Gene Namerelated to ABI3/VP1 1
Annotated Gene Symbol(s)RAV1, EDF4
Annotation TypeOrtholog
Chromosome Positionchr1:4542386-4543420 | Forward length=344
E-Value1E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.267001473033
Replicate 210.61937596113
Replicate 315.553304511013
Condition 2: 8 Hour
Replicate 114.646279495003
Replicate 220.86327081718
Replicate 315.384852419589
Condition 3: 24 Hour
Replicate 114.050390104715
Replicate 29.7287631595849
Replicate 39.9581473979648


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5965.p1 GENE.R_Transcript_5965~~R_Transcript_5965.p1 ORF type:complete len:433 (+),score=49.37,B3|PF02362.17|2.6e-28,AP2|PF00847.16|8e-09 R_Transcript_5965:95-1300(+)
ATGGAGGCAAGCAGTATAGATGAAAGCTCCTCTACAAGTGATTCTCAGTCAACTCTACCCTCTCTCCCGGTCAAACCGAAAATTCCGGCCATTGCGGTGGCCAGAAAGTCGACTCCGCCGGGTGCTCCGGGGAGCCTCTGCCGGATGGGGAGCGGTACGAGTGTGATCACCGACTCGGAGAATGGGATCGAGGCCGAGTCAAGGAAGTTGCCGTCGTCTAAGTATAAGGGGGTGGTTCCTCAGCCTAATGGCCGCTGGGGTGCCCAAATCTATGAAAAACACCAGCGCGTGTGGCTCGGCACTTTCAATGAGGAAGACGAGGCTGCGCGTGCTTATGACGTCGCCGCCCAACGCTTCCGTGGCCGCGACGCCGTCACCAACTTTAAGCCACTCTCGGCTGAAGACGGCGACGGCGCCGCCGAGCTCCGGTTCCTCAACTTCCGATCCAAGGCCGAGATTGTCGACATGCTTAGGAAACACACTTACCACGACGAGCTCCTCCAGAGCAAGCGTAACTCCAAGAACAATAATAACAACAGCAACAACAGTAGCAATAATAATAATGATGAATATAATAGTTTGTATAAGTCCAACTTCCTTAGTGGGGCTAAGGACGTTGGACGTATGGGGCCCAGCCGGGAGCAGCTTTTCGAGAAAACCGTCACACCCAGTGATGTCGGAAAGCTGAACCGGCTGGTCATCCCCAAGCAGCACGCCGAAAAGCACTTCCCGCTCCAGGGTAGCGGGAGGGGGACGTGCTCCTCAACTTCGACAAAGGGCGTGCTGCTAAACTTTGAGGACGTCAACGAGAAGGTCTGGCGGTTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTCACAAAAGGGTGGAGCAGGTTCGTCAAGGAGAAGAATCTCAAGGCCGGAGATGTCGTCATTTTTCAGAGATCTACTGGGCCTGATCAGCAGCTTTACATTGACTGGAAGCCAAGTAGTATCACCACTGCCGCAACCAAGGGGCATGAGCCTGGGCCCATTGAGCCTGTGCTGGGCCGGATTGTGAATACCCAGGAGGAGGTCCGCCCCGCTCAAATGCTCCGGTTGTTTGGAGTGGATATATGTAGAATTGCTGACGCCGGCAATGGCAAGAGGTTGAGGGAAGTGGAGCTTTTGTCTATGGAGCCTAATAGTAAGAAGCAGATGGTTGTTGCTGCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5965.p1 GENE.R_Transcript_5965~~R_Transcript_5965.p1 ORF type:complete len:433 (+),score=49.37,B3|PF02362.17|2.6e-28,AP2|PF00847.16|8e-09 R_Transcript_5965:95-1300(+)
MEASSIDESSSTSDSQSTLPSLPVKPKIPAIAVARKSTPPGAPGSLCRMGSGTSVITDSENGIEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSAEDGDGAAELRFLNFRSKAEIVDMLRKHTYHDELLQSKRNSKNNNNNSNNSSNNNNDEYNSLYKSNFLSGAKDVGRMGPSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQGSGRGTCSSTSTKGVLLNFEDVNEKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDVVIFQRSTGPDQQLYIDWKPSSITTAATKGHEPGPIEPVLGRIVNTQEEVRPAQMLRLFGVDICRIADAGNGKRLREVELLSMEPNSKKQMVVAAL*

Click here to download the sequence:
Link to NCBI Protein BLAST