Transcript Information: R_Transcript_59693.p1


Annotated TAIR IDAT1G26670.1
Annotated Gene NameVesicle transport v-SNARE family protein
Annotated Gene Symbol(s)VTI12, ATVTI12, VTI1B
Annotation TypeOrtholog
Chromosome Positionchr1:9216103-9217793 | Forward length=222
E-Value3.6E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1132.49693978738
Replicate 299.638693493414
Replicate 3113.102016881
Condition 2: 8 Hour
Replicate 1108.87464949757
Replicate 2134.66441787393
Replicate 3114.58204204119
Condition 3: 24 Hour
Replicate 1115.40397740355
Replicate 292.553318558673
Replicate 3108.36368079361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59693.p1 GENE.R_Transcript_59693~~R_Transcript_59693.p1 ORF type:complete len:224 (+),score=48.17,V-SNARE_C|PF12352.4|8.2e+02,V-SNARE_C|PF12352.4|5.9e+03,V-SNARE_C|PF12352.4|1.1e-23,V-SNARE|PF05008.11|3.5e-23,V-SNARE|PF05008.11|2.3e+03,V-SNARE|PF05008.11|77,Sec20|PF03908.9|2.5e+03,Sec20|PF03908.9|3.2e+03,Sec20|PF03908.9|1.4e+02,Sec20|PF03908.9|1.5e-05 R_Transcript_59693:212-883(+)
ATGAGTGAGGTATTTGATGGGTATGAACGCCAGTACTGTGAGCTCTCAGCTAATCTCTCTCGAAAATGTTCTTCTGCTTCCCTTCTTCCCGATCAAGAGCAGAAGCAGCAGAAGATGACCGAAATTAAAGCAGGCCTGGAAGAGGCGGATATGTTGATAAGGAAAATGGACCTTGAAGCAAGGAGCTTGCAACCAAATGTGAAAGCGATGCTTCTTGCTAAGCTGAGGGAATATAAATCCGACTTGAATAATCTGAAGAGAGAGGTGAAGAGAATAAGTTCACCCAATCATGACCAGGCTGGACGTGAAGAGTTGCTGGAAGCTGGAATGGCAGATGTGTACAAGGCTTCTGCAGACCAGAGGGAAAGATTGGCATTTTCAACGGAAAGATTAAATCAATCAAGTGACAGAATTAGGGAGAGTAAAAGAACTATACTGGAGACAGAAGAGTTGGGTGTATCAATTCTTCAAGACTTGCATCAGCAAAGGGAAACCCTCCTACATTCACATGCCAAGCTTCATGATGTGGACAATGCCATCGACAAAAGCAAGAAGATCCTGACTTCTATGTCTCGCAGAATAAGCAAAAACAAATGGATTTTTGGTTCGGTCATTGGCGTTCTCATCCTTGCGATAATTTTTATTATCTATTTTAAGCTTACTCATCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59693.p1 GENE.R_Transcript_59693~~R_Transcript_59693.p1 ORF type:complete len:224 (+),score=48.17,V-SNARE_C|PF12352.4|8.2e+02,V-SNARE_C|PF12352.4|5.9e+03,V-SNARE_C|PF12352.4|1.1e-23,V-SNARE|PF05008.11|3.5e-23,V-SNARE|PF05008.11|2.3e+03,V-SNARE|PF05008.11|77,Sec20|PF03908.9|2.5e+03,Sec20|PF03908.9|3.2e+03,Sec20|PF03908.9|1.4e+02,Sec20|PF03908.9|1.5e-05 R_Transcript_59693:212-883(+)
MSEVFDGYERQYCELSANLSRKCSSASLLPDQEQKQQKMTEIKAGLEEADMLIRKMDLEARSLQPNVKAMLLAKLREYKSDLNNLKREVKRISSPNHDQAGREELLEAGMADVYKASADQRERLAFSTERLNQSSDRIRESKRTILETEELGVSILQDLHQQRETLLHSHAKLHDVDNAIDKSKKILTSMSRRISKNKWIFGSVIGVLILAIIFIIYFKLTHH*

Click here to download the sequence:
Link to NCBI Protein BLAST