Transcript Information: R_Transcript_5976.p1


Annotated TAIR IDAT3G49490.1
Annotated Gene Nameunknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18344926-18348648 | Reverse length=953
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.005872309003
Replicate 216.270445017131
Replicate 322.501634519693
Condition 2: 8 Hour
Replicate 124.131567866015
Replicate 233.577272732584
Replicate 336.317812567639
Condition 3: 24 Hour
Replicate 129.232449074504
Replicate 221.647484811411
Replicate 330.192364343019


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5976.p1 GENE.R_Transcript_5976~~R_Transcript_5976.p1 ORF type:complete len:1244 (+),score=271.44 R_Transcript_5976:229-3960(+)
ATGATGGGCTCATCTAATTCATATAAGGGGGGAGGGTGGTCTTTATCATCATCATCAAATTTATCAGCATTAGCTCCACCATTTAAGGTTGATAAACCCCTTCCAAAACCCAATTCAACCACCAACCCGTCAATGAACTTCTCTGAGGTGCCTATGTATGGTGCTGTCTTTGATCCTGCTGGCCCCTTTTGGAATGCCTCGTCTTCCTTATTGACCAAGACAATGGGTACGGGTACTAATACCAGCTGTGTAACTTCCCCTAGCATTTATTACCCAGGTTCTCAATCCAGCAATTTGGTTGCATCCGTTTACTATGTTGGGTCGAGTGGTGGCACTGCGTATGACCCCTTTTCGTATGACCTACTGCCACATAGTGTGTCTGTGACTGCGAGTGCTGATGAGGCTGGAAAGGCTTATTATTCTCCATATGTTTCTCCGACTCCTCCTCCTAAGAAAGATGGGTACTTGGGGTTGGGGGTTGGTTGCGAGGCTGGTTATGATTTGCTGTCTAATTCTGGGTCTGCTAATTTGAATGGATGTGGATCCTCTCAAGTTGATCATACACAAGGCTCGTCTGTTGGCGGGGAGTATAAACCTAAGTGGGGTGATTTTTGGATGGGGGTGAATGATGGGGAGCATGGCAAATGGACAGAATATGCTCAAGGCTTCGGTTCTAGTGTCATTAATGTCTCTGGTTTATCAGGCAACACTAATCATATATCTGTTGATGGGAACAACAAGAATTATCCTTCTGTTGATGGAAGCAACAAGATTCATCATTTTGGCGATGAACGGGACCAGAGTCATTTAAAGCAAGGTGCTTGCCAATCTCAGGGCTTAGAGTCATACAGAAAAATGCCGACTGTCTCAAATAACTGTTTTGATATTTTTGGTGGTGTGCATCACTTTGGAAGCCTTGGCATAGATCAGCAAGATTGTAAGTCGTCGTTTGATCTGGATTCAGGAGGCACCTCTTCTGTTGGCTCAAAAGTGCCAACTTTTGTTTCTGCGTCCATCTCTAAAGAAAGCCCTCATCTTCAGGAACCAGTTCTGGAATCTGTGACAAATTTATGTGGTTCTCAAAAGGCAAGTGGTTCTTCATTTGAGGAACTCTTCTCTCAAAGTGGCTCTTTCGTGTTTGGTTGTATATCAGGGACAAGTACTTCCCCTATTACTGTGAATAAATCATGTGGGAATAGCTTTTCCCAAACTACACTTTCAGGTACTCTAATGAACTCAATGGGAAGTAACGCTTCTGCTGGTTATGACTTCTCTTATCAAAAGGACCCTCAGGCCCCCCGTGGATTGAAATGCCAATCTGGCATTATAGGCAGAAGGTCCGTTTCATCCGGCATGTCAGTATCCTCAAGCCAAATTGGAGCAACAGTGGATATGCTTGCTGGTAAGGATGCATCTGATTGTGGCAAATTTACACCCCAAGTACCGTATCAATTTAGTTCAGAACTCTTTCACCATGAAACTGATGATGCTGAAGCAATATGTTCTACTGAGAAACTTTCTGGGGGGACTGACGTTCATAATCCTGCTGAGGATTCACCGTGCTGGAAAGGAGCCTCATCTACTCGTTTTTCACCATTTGGAGTCTCTGAAGCCATGGGTCCTGATGTTGTGAAAAGGCTGGATGGATGCGGAAGTTTGAGTTCTCAGGAACTGCAGAATAAGAGTGTCTTTGTGGACACTTCTGATGCTATAGATCCTTCTTTTAAAAGGGTAAGCGAGAGCACTTCCATAAAGAGACCTAGTGATTCTACTTGCGCATCAAAAGATCATGAAGACTCTGGCTCCTTGAACCAGAAACCCTGTCGCTTTGACCTGAATACTGGAACAGGTCTTCAATTTGTTGATGACTGTCGAGTTTATACTGAAGTTTCTAGCTTGCTAAACAAAACAAAAACAGAGTCTGACTCTTGTTTGGCTACTCATAAGATCCTTGAAGATGGTGAAGTTTCATGTGCAAGAAAATTATCTGATGCAGCTGCTGCTGAAAATTATGGAAATTGCGCTCCTGTTGCAGCGCATATTTTTTCTGGGGTACCAACAAATATTAGCCATGATCTTTCCAGCTCACCTGCTAGAGATAAGATCATGTCAGAGAACTGCGAATCATCCATGAAAGTTTCAGACCCAAACATTGATATAAATGTGCTTGTAAAAACAATGGCGAATCTGTCAGAATTATTTCGCTGCTACTGCATCAGTACTCCAGCTGCTGTTGCGCAGCACTCTATGAAAATCAAGCACATTATCGACAATCTTACTAGTTCTATGCTGGTGATGCCTGGTTCAACAAGTCCAAGGGTAAAGGTTTCTTCTCAAGACACTTCTTTCCAGAAAGCACGACTTGCTAGTGAGATGGTCTACAATGCTGAAGCAGTTGCTGCTGCCCTTAAGCTTTGCAGAGGAATTGAGGACTCTCTGGATTCGATTTATTTCAAAGATGATGCAAACACACTCGGGGATGATAATATGACAGAGGCTATAAAGAAGATACTTCATGAGAATTTACAGGGGGAGGAGGAAACGGACCTGGATAAACTCCTGTATAAGAATCTCTGGCTTGAAGCAGAAGCTGCACTTTGCTCTATGACTGCTAAAGCTCGTCTACATCGTATGAAGATTGAGATGGGGAGGACACACACTGGCACAATAGATCTGGTCAAGCCATCAGACTCCAAAATTTCCTCTGATGTGCATGGTGTTGTTGAATTGGAATCCAAGGATAAAGATTCACCATCATTGGTTGTCTGTGATCATGAACCTCCTAAACCAAGTGCCACCAGCATGTGTAATGATACTGCGGCATCTGTTGTAAGAAATTTCCATATCCCCGTTTCACATGAGGCAAGTTTGAAAACCGAAAAATCTGAAGCACCGGGACCTGCAAGAGAAGAAATCTGCTCTCCGTCTCTGAATGGTACTATCCCAGATACTTCTTGTCACAACTCCATTGTTTCTGACACAACCACAACCAACCATGCCAATGATGCTGAGAATTCTGTTACTGCCAGTGCCAGATATCAAATTCTTAAAGATAGGATTGACAAGTCTGACTCTCTGAAGTGTGAAGGCAAACAATCCCTGGATGAAGAAAATATTCTGCTGGAAAAAGATTATTTGGACCTAGATTCATTTGGCAATAATTCCCACGGTTCAGGCTCTATTACAAATGATGCTGAGATTTCTGTCTTGGCCAGATATCACATTCTTAAGTGTAGAGTTGACAGCTATGATTCTCTGCATTGTGAGGGGAAACCATCATCAGGAGAAGAAAATTATTTGGCTGATAACGTTTCCTTAAACGCAGATAAGCTATTCAATAATTCCCTATTATCTAACTCCATTGGTGTTTCTGATGACAGTGAGGCTTCTGTTATCACTAGGTTCCGTGTCATACAAAGCCATATGAATGCCTTGAACTCTATGAACAACCCGACTCCAGCAGACGATCTAGCTCAAGGACATGGCTGGTCGCAGCAGAAATGCAATGTCATGAGAACCGCATTTGGGCCATACCCAGATTTCTCTGAGGATGAAAATGTGAAAGAACTTGACATCTGTGTCAATGGGGAAGCATCTACGACTCTATCGTCAAAGGCTACAAACAGGCTGAACAGCAAGATATTTGAAAGCTGGTATGATCAGTATGACAATGACTGTTCGTCGACTGATTGGGAACATATTTCGAAGGAGGATATCAGAAGACAGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5976.p1 GENE.R_Transcript_5976~~R_Transcript_5976.p1 ORF type:complete len:1244 (+),score=271.44 R_Transcript_5976:229-3960(+)
MMGSSNSYKGGGWSLSSSSNLSALAPPFKVDKPLPKPNSTTNPSMNFSEVPMYGAVFDPAGPFWNASSSLLTKTMGTGTNTSCVTSPSIYYPGSQSSNLVASVYYVGSSGGTAYDPFSYDLLPHSVSVTASADEAGKAYYSPYVSPTPPPKKDGYLGLGVGCEAGYDLLSNSGSANLNGCGSSQVDHTQGSSVGGEYKPKWGDFWMGVNDGEHGKWTEYAQGFGSSVINVSGLSGNTNHISVDGNNKNYPSVDGSNKIHHFGDERDQSHLKQGACQSQGLESYRKMPTVSNNCFDIFGGVHHFGSLGIDQQDCKSSFDLDSGGTSSVGSKVPTFVSASISKESPHLQEPVLESVTNLCGSQKASGSSFEELFSQSGSFVFGCISGTSTSPITVNKSCGNSFSQTTLSGTLMNSMGSNASAGYDFSYQKDPQAPRGLKCQSGIIGRRSVSSGMSVSSSQIGATVDMLAGKDASDCGKFTPQVPYQFSSELFHHETDDAEAICSTEKLSGGTDVHNPAEDSPCWKGASSTRFSPFGVSEAMGPDVVKRLDGCGSLSSQELQNKSVFVDTSDAIDPSFKRVSESTSIKRPSDSTCASKDHEDSGSLNQKPCRFDLNTGTGLQFVDDCRVYTEVSSLLNKTKTESDSCLATHKILEDGEVSCARKLSDAAAAENYGNCAPVAAHIFSGVPTNISHDLSSSPARDKIMSENCESSMKVSDPNIDINVLVKTMANLSELFRCYCISTPAAVAQHSMKIKHIIDNLTSSMLVMPGSTSPRVKVSSQDTSFQKARLASEMVYNAEAVAAALKLCRGIEDSLDSIYFKDDANTLGDDNMTEAIKKILHENLQGEEETDLDKLLYKNLWLEAEAALCSMTAKARLHRMKIEMGRTHTGTIDLVKPSDSKISSDVHGVVELESKDKDSPSLVVCDHEPPKPSATSMCNDTAASVVRNFHIPVSHEASLKTEKSEAPGPAREEICSPSLNGTIPDTSCHNSIVSDTTTTNHANDAENSVTASARYQILKDRIDKSDSLKCEGKQSLDEENILLEKDYLDLDSFGNNSHGSGSITNDAEISVLARYHILKCRVDSYDSLHCEGKPSSGEENYLADNVSLNADKLFNNSLLSNSIGVSDDSEASVITRFRVIQSHMNALNSMNNPTPADDLAQGHGWSQQKCNVMRTAFGPYPDFSEDENVKELDICVNGEASTTLSSKATNRLNSKIFESWYDQYDNDCSSTDWEHISKEDIRRQS*

Click here to download the sequence:
Link to NCBI Protein BLAST