Transcript Information: R_Transcript_5981.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0443316269285
Replicate 22.3515856466254
Replicate 32.0157929084614
Condition 2: 8 Hour
Replicate 13.7218514719813
Replicate 21.7888705472949
Replicate 31.7425546195571
Condition 3: 24 Hour
Replicate 12.5712744095029
Replicate 20.88221035562309
Replicate 32.4514229249325


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5981.p1 GENE.R_Transcript_5981~~R_Transcript_5981.p1 ORF type:complete len:125 (+),score=15.01,Herpes_Helicase|PF02689.10|3.9e-09,UvrD_C_2|PF13538.2|1.9e-05 R_Transcript_5981:1003-1377(+)
ATGACATTTCTCGGAAAGAACTGGTTGAAATGGAGAAAGAACCAATTACTCAGAAGAACTCTGGACATACCCGGACTCAAAATGGGAATATGGTGGATCAATCGAAGAATAATCAGCATCAAGGACCCTGGGCAAAATTGCTCTCATCTGGAACTGAAAATGTTAGAGCAGTTCCCGATTAAACTTTCCTTCGCAATGACCATAAATAAATCTCAAGGCCAAACTCTGACACAAGTAGCCATCTACCTTGGAAAACAATGCTTCTCACATGGCCAGCTCTATGTGGCACTCTCCAGAGCCAAAAAGGCAAGTACTGTGAAGGTTCTTGTTAATGCTGCTAAGGATGGTGAATATCTCTGTTCAACCTATCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5981.p1 GENE.R_Transcript_5981~~R_Transcript_5981.p1 ORF type:complete len:125 (+),score=15.01,Herpes_Helicase|PF02689.10|3.9e-09,UvrD_C_2|PF13538.2|1.9e-05 R_Transcript_5981:1003-1377(+)
MTFLGKNWLKWRKNQLLRRTLDIPGLKMGIWWINRRIISIKDPGQNCSHLELKMLEQFPIKLSFAMTINKSQGQTLTQVAIYLGKQCFSHGQLYVALSRAKKASTVKVLVNAAKDGEYLCSTYP*

Click here to download the sequence:
Link to NCBI Protein BLAST