Transcript Information: R_Transcript_5984.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value9E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6473760163332
Replicate 21.2822168193159
Replicate 31.7486059233704
Condition 2: 8 Hour
Replicate 12.2429799951675
Replicate 21.0241625270772
Replicate 32.2169906101236
Condition 3: 24 Hour
Replicate 12.979257426496
Replicate 22.8621328331284
Replicate 32.6733074426745


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5984.p1 GENE.R_Transcript_5984~~R_Transcript_5984.p1 ORF type:5prime_partial len:131 (+),score=3.20,PIF1|PF05970.10|1.6e-16 R_Transcript_5984:3-395(+)
ATAGCCAACTTCCTGGGTCAAGAACATAACTATAAGAGTTTTGACAACATTGTTGATGACGATTGCAATGCTCATCCGGTTGAGTTCCTCAATACTCTTTGCCCCGGAGGAATGAGCCCACATAATTTGACGTTGAAGCTCAATTGTCCAGTTATATTGTTGCGTAATCTGAACCCAGCACTTGGTCTGTGCAATGGAACTCGACTGATTTGCAGAGGGTTCAAGCCAAATCTGGTTATATGTGAAATCGCAACTGGATATCGTTGTGGTGATTATGTCTTCATCCCCCGAATAAACCTCAGACCCTCAAGTTCCAGCACATATCCCTACAGATTTGAGCGGCGCCAGTTCCCGATTAAACTATGCTTCGCAATGGCCATAAATAAATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5984.p1 GENE.R_Transcript_5984~~R_Transcript_5984.p1 ORF type:5prime_partial len:131 (+),score=3.20,PIF1|PF05970.10|1.6e-16 R_Transcript_5984:3-395(+)
IANFLGQEHNYKSFDNIVDDDCNAHPVEFLNTLCPGGMSPHNLTLKLNCPVILLRNLNPALGLCNGTRLICRGFKPNLVICEIATGYRCGDYVFIPRINLRPSSSSTYPYRFERRQFPIKLCFAMAINKS*

Click here to download the sequence:
Link to NCBI Protein BLAST