Transcript Information: R_Transcript_60001.p1


Annotated TAIR IDAT5G11170.1
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3553334-3556646 | Forward length=427
E-Value1.1E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1220.99272540515
Replicate 2162.63567898219
Replicate 3190.88947996794
Condition 2: 8 Hour
Replicate 1197.42798800121
Replicate 2218.9177243193
Replicate 3254.08023723875
Condition 3: 24 Hour
Replicate 1259.06467316857
Replicate 2230.78335002285
Replicate 3250.61166765044


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60001.p1 GENE.R_Transcript_60001~~R_Transcript_60001.p1 ORF type:complete len:429 (+),score=93.55,DEAD|PF00270.25|9.6e-38,Helicase_C|PF00271.27|89,Helicase_C|PF00271.27|6.1e+03,Helicase_C|PF00271.27|1.1e-28,ResIII|PF04851.11|1e-06 R_Transcript_60001:566-1852(+)
ATGGGCGAGACAAGAGAAAACGAAGCCTACGAAGAGGAGCTTCTCGATTACGAGGAAGAAGACGAGAAAGTTCCAGATTCTGCCGCTACTAAAGCTAATGGCGAAGCTGGCAAAAAGGGCTATGTTGGTATTCACAGCTCCGGATTTAGGGACTTCCTCTTGAAGCCAGAGTTGCTGCGTGCAATTGTGGACTCAGGTTTTGAACATCCATCTGAAGTGCAACACGAGTGTATTCCTCAAGCTATATTGGGCATGGATGTCATATGCCAAGCCAAATCTGGTATGGGGAAGACAGCCGTCTTTGTGCTGTCGACCTTACAACAGATTGATCCTGTCGCTGGACAAGTTGCTGCACTTGTCCTATGTCATACCAGGGAATTAGCTTATCAGATCTGCCACGAGTTCGAGAGGTTCAGTACATATTTACCAGATATCAAGGTTGCTGTTTTCTATGGTGGTGTCAACATCAAGATTCATAAGGACCTGCTCAAAAATGAGTGCCCTCACATTGTTGTGGGTACACCTGGAAGGATACTTGCATTGGCCAGAGACAAAGATCTGTCGCTCAAGAATGTCAGGCATTTTATTCTTGACGAGTGTGATAAGATGCTCGAGTCCCTTGACATGAGGAGAGATGTGCAAGAAATATTCAAAATGACCCCACATGATAAGCAAGTGATGATGTTTTCAGCAACCCTCAGCAAAGCTATCCGGCCTGTCTGCAAGAAGTTTATGCAAGATCCGATGGAAATATATGTTGACGACGAGGCCAAGTTGACCCTTCATGGTCTTGTACAGCACTACATCAAGTTGACCGAGTTGGAGAAAAATCGCAAGTTGAACGACCTTTTGGATGCTCTAGATTTCAATCAGGTGGTTATCTTTGTCAAGAGTGTCAGCCGAGCTGCTGAGCTGAACAAGCTACTGGTTGAGTGCAACTTCCCATCGATCTGCATCCACTCTGGCATGTCCCAGGAAGAGAGGCTGGCTCGCTACAAGGGATTTAAGGATGGAAAGCAAAGAATCCTTGTTGCAACAGATTTAGTCGGTAGAGGAATTGACATTGAAAGAGTGAACATTGTTATTAATTACGACATGCCTGACTCTGCAGACACTTACTTGCATAGGGTTGGTAGAGCTGGGAGGTTTGGCACCAAGGGTCTTGCTATTACATTTGTGTCTTCTGCATCAGACTCCGATGTTCTTAATCAGGTCCAGGAAAGGTTTGAGGTGGATATTAAAGAACTTCCTGAGCAAATCGACACCTCTACATACATGCCATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60001.p1 GENE.R_Transcript_60001~~R_Transcript_60001.p1 ORF type:complete len:429 (+),score=93.55,DEAD|PF00270.25|9.6e-38,Helicase_C|PF00271.27|89,Helicase_C|PF00271.27|6.1e+03,Helicase_C|PF00271.27|1.1e-28,ResIII|PF04851.11|1e-06 R_Transcript_60001:566-1852(+)
MGETRENEAYEEELLDYEEEDEKVPDSAATKANGEAGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKAIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLARYKGFKDGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS*

Click here to download the sequence:
Link to NCBI Protein BLAST