Transcript Information: R_Transcript_60006.p1


Annotated TAIR IDAT4G15640.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8919245-8921852 | Reverse length=390
E-Value8.5E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.303046402838
Replicate 219.829839282059
Replicate 321.876540402675
Condition 2: 8 Hour
Replicate 116.647797067307
Replicate 217.510108531722
Replicate 318.967952896965
Condition 3: 24 Hour
Replicate 127.938072287682
Replicate 225.497746389371
Replicate 326.346311197191


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60006.p1 GENE.R_Transcript_60006~~R_Transcript_60006.p1 ORF type:complete len:378 (+),score=44.71 R_Transcript_60006:114-1247(+)
ATGGCCATGAGGCGCCTGTCAGTGTACCTGTCGTCCCGGCGTTTATGTACCTTTCTGGGCGTTTCGTCTCTCCGAGACGTTTCAGGTGCGAGAAACGCGGCCTTGTTGACATTTCCGGGCAAGATAGAGCAGATTATTCCTAAGTGCTCAAGGCCACTTACAGCTTCTTTCTGTTCTTCACCAGAAAACGCGAACAGCGGTAACCCTACAGATAATGTCAAGGAAGTGTATGATAAATTAGTTGAATCTATTAAGGTCAAACGTTCTGCACCTCCAAATGCTTGGCTCTGGTCACTCATTGAGAAATGTAAAACCCAGGATGATATTAAACTCTTATTCGACGTTTTACAGCAGCTTCGGATATTTCGGCTATCGAATCTTCGGATTCACGACAATTTTAATTGTAAACTGTGCCAAGAGGTTACAAAGGCATGTATACAATCTGGGGCTGTGGACTACGGGAAGAGAGTTATATGGAAACACAATGTTTATGGTTTGACTCCTACAGTCGGATCCGCCAACCAACTATTGTCTCATGCTAAGAAACACAAAGATACTAGGCTCTTGGAAGAGATAATGAAGCTTCTCAATCAGAATGATTTGCCACTACAACCTTCTGCAGCAGATATTGTTTTCAGCATTTGCTATGATGCTGATAACTGGGGGCTGATATCTAAATACTCCAAAAGGTTTCTCAAGGGTGGAGTGAAATTGCGGAAAACAACATTCGACATTTGGATGGAATTTGCTTCCAGGAGAGGTGACATCGAGTCTTTATGGAAAATTGAGAAATTGAGATCAGAAACATACAAAGAACACACTATCAAGAGCGCATTTTCTTGTGCTAAGGGTTTCTTGCTTGAACGAAAACCTGATGGTGCTGCTGCGATAATTCAAGCTGTCACTCAGAGTTTCCCAGATTCAAAAAGGCAAGACATAATTGTGGAACTCCAAAAGCTGGTCAGTGTTTGGCCTGTCGAGTTGGTAAAGTATCAAAAGCAGGAGAATCAGAAGGCAATAATTTCTTGTTTAAAGGCCGATATTCCTGCTATGATTAGTAGCCTCTCAACCATGGGTGTTGAGTCCAGTGTGAACTTGGAAGACCTAAACAAGGCTGAGTCATTACCATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60006.p1 GENE.R_Transcript_60006~~R_Transcript_60006.p1 ORF type:complete len:378 (+),score=44.71 R_Transcript_60006:114-1247(+)
MAMRRLSVYLSSRRLCTFLGVSSLRDVSGARNAALLTFPGKIEQIIPKCSRPLTASFCSSPENANSGNPTDNVKEVYDKLVESIKVKRSAPPNAWLWSLIEKCKTQDDIKLLFDVLQQLRIFRLSNLRIHDNFNCKLCQEVTKACIQSGAVDYGKRVIWKHNVYGLTPTVGSANQLLSHAKKHKDTRLLEEIMKLLNQNDLPLQPSAADIVFSICYDADNWGLISKYSKRFLKGGVKLRKTTFDIWMEFASRRGDIESLWKIEKLRSETYKEHTIKSAFSCAKGFLLERKPDGAAAIIQAVTQSFPDSKRQDIIVELQKLVSVWPVELVKYQKQENQKAIISCLKADIPAMISSLSTMGVESSVNLEDLNKAESLPC*

Click here to download the sequence:
Link to NCBI Protein BLAST