Transcript Information: R_Transcript_60072.p1


Annotated TAIR IDAT3G20430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7121480-7123074 | Forward length=265
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.510456384695
Replicate 214.272766013326
Replicate 312.354195557475
Condition 2: 8 Hour
Replicate 112.93073766877
Replicate 214.446637144586
Replicate 316.316054490236
Condition 3: 24 Hour
Replicate 116.895914308029
Replicate 213.753560319405
Replicate 313.03425110568


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60072.p1 GENE.R_Transcript_60072~~R_Transcript_60072.p1 ORF type:internal len:178 (+),score=44.69 R_Transcript_60072:3-533(+)
GGGAATTCACGAAACGCTATTTGCTTGTCAGGCTCTCAGCCTTCTCCTCCGTCAGTATATACTACAAGTCTCTCAGTTGAACACCCAAATCTCTCCTTTGATTTCCATAATAACTTCGTTTTTGAGGTTCAATCGAAGGGTTTAATCATGGAGGGTGCTGATAGCATATTAGATGCTATACATGAAGAGGTGAGCTTGGAAGATGGGGAAGATGTGGAGATGATGGATGTAGAAGAAGGAGAGGTTGTTAATGGGCAGAAGTCATGGCAAATTGGTGAAGGAGATGAAAATGAAGCAAAGGGTGGAGAACCTCATTCAATAAATTCGGAGCGTGCTAAAAACATGAAGAAGAAGAGGAAGAAGAAGCAGAAGAAGAATAAGAGAAAAGCAGGCGCTCCTGGATCAAATGGGTTAGACATTGACAGGTTTGTCCTGGATGTCTGTAAGCGGTTAAGGGAAAGAAAGTCATACCTTGTATATACGGCTGTCGGCGTTCTTGGGGTATCTGCCTTAAGTGATCTTGTGAAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60072.p1 GENE.R_Transcript_60072~~R_Transcript_60072.p1 ORF type:internal len:178 (+),score=44.69 R_Transcript_60072:3-533(+)
GNSRNAICLSGSQPSPPSVYTTSLSVEHPNLSFDFHNNFVFEVQSKGLIMEGADSILDAIHEEVSLEDGEDVEMMDVEEGEVVNGQKSWQIGEGDENEAKGGEPHSINSERAKNMKKKRKKKQKKNKRKAGAPGSNGLDIDRFVLDVCKRLRERKSYLVYTAVGVLGVSALSDLVKE

Click here to download the sequence:
Link to NCBI Protein BLAST