Transcript Information: R_Transcript_60074.p2


Annotated TAIR IDAT3G20430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7121480-7123074 | Forward length=265
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 31.006889564666
Condition 2: 8 Hour
Replicate 10.26907543898072
Replicate 21.4743438576606
Replicate 32.1941507343325
Condition 3: 24 Hour
Replicate 11.0091343836353
Replicate 20.48473096462807
Replicate 31.4431453639712


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60074.p2 GENE.R_Transcript_60074~~R_Transcript_60074.p2 ORF type:5prime_partial len:91 (+),score=20.97,RNA_GG_bind|PF10258.5|4.3e+03,RNA_GG_bind|PF10258.5|1.4e-05 R_Transcript_60074:3-275(+)
GATGAAAATGAAGCAAAGGGTGGAGAACCTCATTCAATAAATTCGGAGCGTGCTAAAAACATGAAGAAGAAGAGGAAGAAGAAGCAGAAGAAGAATAAGAGAAAAGCAGGCGCTCCTGGATCAAATGGGTTAGACATTGACAGGTTTGTCCTGGATGTCTGTAAGCGGTTAAGGGAAAGAAAGTCATACCTTGTATATACGGCTGTCGGCGTTCTTGGGGTATCTGCCTTAAGTGATCTTGTGAAGGAGGTTCAGAGATTACCCTCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60074.p2 GENE.R_Transcript_60074~~R_Transcript_60074.p2 ORF type:5prime_partial len:91 (+),score=20.97,RNA_GG_bind|PF10258.5|4.3e+03,RNA_GG_bind|PF10258.5|1.4e-05 R_Transcript_60074:3-275(+)
DENEAKGGEPHSINSERAKNMKKKRKKKQKKNKRKAGAPGSNGLDIDRFVLDVCKRLRERKSYLVYTAVGVLGVSALSDLVKEVQRLPSI*

Click here to download the sequence:
Link to NCBI Protein BLAST