Transcript Information: R_Transcript_60079.p1


Annotated TAIR IDAT3G20430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7121480-7123074 | Forward length=265
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4439548971167
Replicate 23.3673311988403
Replicate 34.5381272596151
Condition 2: 8 Hour
Replicate 14.6199745183482
Replicate 25.6956963180378
Replicate 35.3084898984151
Condition 3: 24 Hour
Replicate 14.9814110022377
Replicate 23.7452326417961
Replicate 34.7492189414966


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60079.p1 GENE.R_Transcript_60079~~R_Transcript_60079.p1 ORF type:5prime_partial len:106 (+),score=24.98 R_Transcript_60079:3-320(+)
GATGAAAATGAAGCAAAGGGTGGAGAACCTCATTCAATAAATTCGGAGCGTGCTAAAAACATGAAGAAGAAGAGGAAGAAGAAGCAGAAGAAGAATAAGAGAAAAGCAGGCGCTCCTGGATCAAATGGGTTAGACATTGACAGGTTTGTCCTGGATGTCTGTAAGCGGTTAAGGGAAAGAAAGTCATACCTTGTATATACGGCTGTCGGCGTTCTTGGGGTATCTGCCTTAAGTGATCTTGTGAAGGAGATGCCTTTTGCAGAAGCTTCTTACTTCTCACAGTGTACGGATTTCTGGGCTGAGACATGCCCTGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60079.p1 GENE.R_Transcript_60079~~R_Transcript_60079.p1 ORF type:5prime_partial len:106 (+),score=24.98 R_Transcript_60079:3-320(+)
DENEAKGGEPHSINSERAKNMKKKRKKKQKKNKRKAGAPGSNGLDIDRFVLDVCKRLRERKSYLVYTAVGVLGVSALSDLVKEMPFAEASYFSQCTDFWAETCPG*

Click here to download the sequence:
Link to NCBI Protein BLAST