Transcript Information: R_Transcript_60081.p1


Annotated TAIR IDAT3G20430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7121480-7123074 | Forward length=265
E-Value8.4E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3817121508054
Replicate 27.2560744085736
Replicate 35.3898206108594
Condition 2: 8 Hour
Replicate 17.9218974829323
Replicate 24.2748744696384
Replicate 38.1415312341442
Condition 3: 24 Hour
Replicate 15.57064440084
Replicate 26.9733539139325
Replicate 37.5641332373836


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60081.p1 GENE.R_Transcript_60081~~R_Transcript_60081.p1 ORF type:3prime_partial len:136 (+),score=32.91,RNA_GG_bind|PF10258.5|9.8e-21 R_Transcript_60081:63-407(+)
ATGAAGAAGAAGAGGAAGAAGAAGCAGAAGAAGAATAAGAGAAAAGCAGGCGCTCCTGGATCAAATGGGTTAGACATTGACAGGTTTGTCCTGGATGTCTGTAAGCGGTTAAGGGAAAGAAAGTCATACCTTGTATATACGGCTGTCGGCGTTCTTGGGGTATCTGCCTTAAGTGATCTTGTGAAGGAGGTAGATGCTGTGCAGGCTTGTGGAGGACAGAAGACTGCTGATGGGTATTGCTTTAGGACTGGTGGGGGCATATTATGGAATATACTTAAAGCACGGGACCCGAATGCCTATAAGGAGATAATGAAGAAAGGAAAAGACTTTGAGAAACAATTTAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60081.p1 GENE.R_Transcript_60081~~R_Transcript_60081.p1 ORF type:3prime_partial len:136 (+),score=32.91,RNA_GG_bind|PF10258.5|9.8e-21 R_Transcript_60081:63-407(+)
MKKKRKKKQKKNKRKAGAPGSNGLDIDRFVLDVCKRLRERKSYLVYTAVGVLGVSALSDLVKEVDAVQACGGQKTADGYCFRTGGGILWNILKARDPNAYKEIMKKGKDFEKQFR

Click here to download the sequence:
Link to NCBI Protein BLAST