Transcript Information: R_Transcript_60101.p1


Annotated TAIR IDAT5G40600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16254907-16256765 | Reverse length=325
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5293463938215
Replicate 25.3146885428754
Replicate 37.4446897187495
Condition 2: 8 Hour
Replicate 17.039686172333
Replicate 26.0094869948186
Replicate 37.6577107304757
Condition 3: 24 Hour
Replicate 18.2504619724562
Replicate 25.100278618446
Replicate 310.533457880569


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60101.p1 GENE.R_Transcript_60101~~R_Transcript_60101.p1 ORF type:3prime_partial len:320 (+),score=75.46,BET|PF17035.1|1.5e-12 R_Transcript_60101:150-1106(+)
ATGCTAGAGGAATTTGGAAATTCGGAAGTTTCGGTCCAGCAAGTTAGAATGGGGCTTGATTTATTTGGTTTCTACAAACGTGAAATAATAGATTTGTTAAATAAGGATGAGGGTTTTTTGGAAACTTCTTCTAGGACTGAACAAGATGTAGGTGTATCTTCAAGGTTGTCGGAGAATAGCAATGTGGGTGATTTGTTTAGTAACAGTTTAGGAGAGGCAGTTGTTGGTGTCAAAAAGGAATTGTTGAATGCATCAATGAGGCAAGGTGTAAAAGCTTTATCAGAGGAGGTTGATGAGATGATTGATCCTTGTATGCGCATCCGTCATATTATTTATTGCTTAACGTCCAAGAAGCAGCAGTCTGGAGGTAAAGCTTTGCTGGACAGGGATTCATCACCGCCAACTTGTAAAAAGCAGAAGATATCTTCAAACAGGGATAACAAATTGTTGACAGATCAAAATGGAGATGCTGATAAAGAAACAGGACAAGTTGATGAAGACTTGAAGATGCTTCTGGATAATGAAGATATTTTTCTGCTTGAAGAAGCGATAACCAAGCACTCTACTGAGCTTGATGTGATGCTAAATGACATGGAAAAGAAGCTCGAAGAGTTACTAAATGCTGTAGTTTCAAAGTGCAGGCTGATGACTCGACAAGAGAAGCAGCAACTTGGGAAACTAATTCAGAAGCTACCCCCGAGGAATCTTCATCGAATTGTCGAGATCATACACCGAAGCCAATCTTCAGACGCTACGTTTGCTGATGAGATATTTGTTGATCTTGAAAAACAGGCAAAGCACGACAGCGGCGCTTCTCCACCACCACCAGCCCCAGCCGGACCACCCCAGTCTGTCGCCACCACCCCCCCACCACCAGGTTCGCCGTTCGTCTTTCAACTAATGAAGGTTGAAGCATTGGCCACCAGCAGCCTTAGCCGCACCACCCGAGCAGCGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60101.p1 GENE.R_Transcript_60101~~R_Transcript_60101.p1 ORF type:3prime_partial len:320 (+),score=75.46,BET|PF17035.1|1.5e-12 R_Transcript_60101:150-1106(+)
MLEEFGNSEVSVQQVRMGLDLFGFYKREIIDLLNKDEGFLETSSRTEQDVGVSSRLSENSNVGDLFSNSLGEAVVGVKKELLNASMRQGVKALSEEVDEMIDPCMRIRHIIYCLTSKKQQSGGKALLDRDSSPPTCKKQKISSNRDNKLLTDQNGDADKETGQVDEDLKMLLDNEDIFLLEEAITKHSTELDVMLNDMEKKLEELLNAVVSKCRLMTRQEKQQLGKLIQKLPPRNLHRIVEIIHRSQSSDATFADEIFVDLEKQAKHDSGASPPPPAPAGPPQSVATTPPPPGSPFVFQLMKVEALATSSLSRTTRAAL

Click here to download the sequence:
Link to NCBI Protein BLAST