Transcript Information: R_Transcript_60102.p1


Annotated TAIR IDAT5G40600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16254907-16256765 | Reverse length=325
E-Value5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.104986103894
Replicate 215.018187103324
Replicate 318.532187013554
Condition 2: 8 Hour
Replicate 118.534439439234
Replicate 222.360881841186
Replicate 325.966887415276
Condition 3: 24 Hour
Replicate 117.457499246067
Replicate 217.460413288374
Replicate 321.735706737683


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60102.p1 GENE.R_Transcript_60102~~R_Transcript_60102.p1 ORF type:complete len:288 (+),score=69.74,BET|PF17035.1|1.3e-19 R_Transcript_60102:146-1009(+)
ATGGTAGAGGATTTTGCAAATTCGGAAGTTTCAGTCCAGCAATTTAGAATGGGACCTGATTTATTTGGTTTCTACAAACATGAAATAATAGATTTGTTAAATAAGGATGAGGGTTTTTTGGAAACTTCTTCTAGGACTGAACAAGATGTAGGTGTATCTTCAAGGTTGTCGGAGAATAGCAATGTGGGTGATTTGTTTAGTAACAGTTTAGGAGAGGCAGTTGTTGGTGTCAAAAAGGAATTGTTGAATGCATCAATGAGGCAAGGTGTAAAAGCTTTATCAGAGGAGGTTGATGAGATGATTGATCCTTGTATGCGCATCCGTCATATTATTTATTGCTTAACGTCCAAGAAGCAGCAGTCTGGAGGTAAAGCTTTGCTGGACAGGGATTCATCACCGCCAACTTGTAAAAAGCAGAAGATATCTTCAAACAGGGATAACAAATTGTTGACAGATCAAAATGGAGATGCTGATAAAGAAACAGGACAAGTTGATGAAGACTTGAAGATGCTTCTGGATAATGAAGATATTTTTCTGCTTGAAGAAGCGATAACCAAGCACTCTACTGAGCTTGATGTGATGCTAAATGACATGGAAAAGAAGCTCGAAGAGTTACTAAATGCTGTAGTTTCAAAGTGCAGGCTGATGACTCGACAAGAGAAGCAGCAACTTGGGAAACTAATTCAGAAGCTACCCCCGAGGAATCTTCATCGAATTGTCGAGATCATACACCGGAGCCAATCTTCAGATGCTACGTTTGCTGACGAGATATTTGTTGATCTTGAAAAACAGGAAAATGCAACCCTTTGGAGACTCTACTTTTATGTGAAAGCTGTTGAAAATGCGAGGAATCTATCAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60102.p1 GENE.R_Transcript_60102~~R_Transcript_60102.p1 ORF type:complete len:288 (+),score=69.74,BET|PF17035.1|1.3e-19 R_Transcript_60102:146-1009(+)
MVEDFANSEVSVQQFRMGPDLFGFYKHEIIDLLNKDEGFLETSSRTEQDVGVSSRLSENSNVGDLFSNSLGEAVVGVKKELLNASMRQGVKALSEEVDEMIDPCMRIRHIIYCLTSKKQQSGGKALLDRDSSPPTCKKQKISSNRDNKLLTDQNGDADKETGQVDEDLKMLLDNEDIFLLEEAITKHSTELDVMLNDMEKKLEELLNAVVSKCRLMTRQEKQQLGKLIQKLPPRNLHRIVEIIHRSQSSDATFADEIFVDLEKQENATLWRLYFYVKAVENARNLST*

Click here to download the sequence:
Link to NCBI Protein BLAST