Transcript Information: R_Transcript_60153.p1


Annotated TAIR IDAT1G50410.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18672828-18677365 | Forward length=981
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2900971480155
Replicate 24.06875291431
Replicate 34.8367974266099
Condition 2: 8 Hour
Replicate 14.1182807589517
Replicate 25.0076929169017
Replicate 36.2385791528935
Condition 3: 24 Hour
Replicate 17.1769379084779
Replicate 25.4230938222717
Replicate 36.8424085949898


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60153.p1 GENE.R_Transcript_60153~~R_Transcript_60153.p1 ORF type:complete len:1094 (+),score=227.03,SNF2_N|PF00176.19|3.3e-72,Helicase_C|PF00271.27|1.2e-15,zf-C3HC4_3|PF13920.2|2.3e-06,zf-C3HC4_2|PF13923.2|3.7e-06 R_Transcript_60153:324-3605(+)
ATGCCTGACACAGAAGAACATCTGAATGGCTTCATTGAATCTACCCGCCGATTTTGCTCTCTCTTTAGTGAATGGATTTGCAGCTTAGGAAATTTCACTAATCTGGTTAAACATTCTTCTATTGGTTCAAATTTTAGGCTTATAGAAGAACACAGAAGTCATTCATCATTGTTCTTGAATAGAATGGAACTTATTGACATCTCCTCCTCAGACTCAGATAGTATACTCGAGTCTGATGATGAACCACAGATCTTATCTTCATCTCAAAATTTGTCTGCTGCTTCATCCTCTAGAAGGAAACTACCGGATTCGTTTTCAAGATCACATACAAACTCGACGGGTCCCCAAAATTTAAAACCTCATTCTCCCAACAGAGGGTCCACTAATAGAGGAGAATCTCTTTCTGGAGGTTATCGATATCAGGCTGGACCTGGTCCAAGCACTAGCTATGGCACTGGTGGTCAAGACTCAAGTTCTTTCATTAGTAGGCATGAGTTTCAGTCTTCTAAAGAGAATGGAAGTACTTTCCAGTCAAAAAAAGATGATGGTCGGAATAATAGGAGTCTTCCATCTTCTTTCCAGTCTTCTGGGGTACGTAACAATATTCATAATGGAGATAATAGAGGGTTTTACCATCCAGTAGAGCTGAGCTCCACTATTTATGGAAGAGACAGTTTTAGCAGGGACAGGGAGGATGATGTTCGTATCCACGATAGACACGAACATAATCGTCGCATTCTTCCTCCTCCTTTGAGCCGTGGAAAGTCTGTTTCCTCAGCACCATATGCTAGTGCAAGTGATCCCCTTCAGAACATTGGTTTTGGGGAAGAGAGGGTCACAGGAGATGAAAGAGTGATCTTTCAAGCAGCATTACAGGATCTTAGTCAGCCAAAAACGGAACTTGACCTTCCTCCAGGGACGTTATCTATCCCTCTTTTGAGACACCAGAAAATTGCTCTAGCTTGGATGGTTCAGAAGGAGTCAACTGTGCATTGCTTAGGTGGAATTCTTGCTGATGATCAGGGACTGGGTAAGACTATTTCAACAATAGCACTCATACAAGAGCAGAGGTCTTTGCAGAGGAAGTCACAATCTGAGGAGAAAGAAAATCACAGTGCTGTAGCGCTGAATTTGGATGATGATGATGATGATGACAAAGGTAGTGCCAGTTTACAGGCTGTCAATAAAACAGAGGATCCTAATATTGCCACATGTAAATCTGAGGAGCTGTGCAATGCCAAAACAGAAACCTTGAATTTGGATGACAATGATGATAATGGAAATGCCAGTTCAGAATCTGTTAAAAAGATGGAGAATGATGGTGGTCCAAAACGCAATTCAGGTGCTAGCTCTTCAAGTCAAAATATTAAGAGGCAGAGACCACCTGCAGGTACGCTGATTGTGTGTCCAGCAACTGTTCTGAGGCAATGGGCTAGGGAATTGGATGACAAAGTTACCGAGGAAGCAAGACTTTCTGTTTTGGTGTACCATGGGGGCAATAGGACTAAGGATGTGACTGAGTTGGCTAAATATGATGTGGTGCTTACCACTTATTCTATTGTAAGCAATGAGGTTCCTAAACAGCCTATAGTTGATGAGGATGATGTTGAGCCAAAACTTGGGGAGAAATATGGATTGTCTTCTGACTTTTCTATTAACAAAAAGAGGAAACATCCATTTACCACCAGTAAAAAGGGAAAGAAAGGTAGGAAACTAGCTGATAGCTCATTGTATGGCCCTAGTGGTGCACTTGCTCGAGTGAGTTGGTTTAGAGTGGTACTAGATGAAGCTCAAACAATAAAAAATCATAGAACCCAAACAGCTAGAGCATGCTGTGGACTGAGAGCTAAAAGACGATGGTGCTTATCTGGAACTCCGATACAGAACTCAGTTGATGAGTTGTACAGTTACTTCAGATTTCTTAGACATGGTGTATATTCTGATTACAAGACATTTTGTGAGGCAATAAAAATTCCTATTTCCAGAGATCCTAATATTGGGTACAAAAAGCTTCAAGCAGTTCTGAAGACTATACTGTTGCGCCGTACAAAAGATACATTACTTGATGGAGAGCCTATTATAAGCTTACCCCCCAAATTTGTAAACATGAAGACGGTGACTTTTACCGGTGAGGAGCGAGCCTTTTATGCCCAATTAGAGGCTGAATCTCGCTCTCAGTTCAAGGCATATGCTGCTGCCGGCACAGTTAATCAGAACTACGCCAACATTCTGTTGATGATTTTACGCCTTCGCCAGGCGTGTGATCACCCACTTCTTGTCAAAGGGTTCAATTCAGACTCTGGTAGAAGAACAAATCTAGAGAAGGCTAGGAAACTCCCAAGGCAAGTGTTGATGGATTTGTTACGTCGTCTGGAGGCACCCTCTGCCCTTTGTCTCATATGCAGTGACCCAGCAGAAGATGCTGTGATAACCATATGTCGCCATGTTTTTTGCTACCAATGTGTGGCAGACTACCTCACTGGTGATGACAATATGTGTCCAGCTAGGTGCAAGGAGCAATTGAGTGATGATGTTCTTTTCTCTGAGGCTACTCTAAGAAGCTGTCTCATGAGTGATGCTGATGGAAATTTGTTGAATGATGATGGTAGTCGTAAGAGTACATCGATACTGAGTAGTGAATACAGTTCCTCTAAAATTAAAGCAGCTCTGGAGATCTTGCAGTCACATTGTAAAGCAAACAGTTTATGTATAGATCTGGATGATTTTGGTGAGTCAGAGACACAGAATTCTGTGCATGCATTGAGAGCTCATGAAACAGAGAGTTCATCCTCTCAAGGACCAATAAAAACTATTGTTTTCTCCCAGTGGACTCGTATGCTGGACTTATTTGAGCTTTCACTTAATCAACATTGCATCCAGTACAGGAGGCTTGATGGTAGCATGACTCTAGTTGCTAGAGACAGGGCTGTCAGAGAGTTCAATACGGATCCTGAGGTGACTGTTATGCTGATGTCCCTAAAAGCCGGAAATCTTGGGTTAAACATGGTTGCTGCTTGCCATGTTATCCTGTTAGATCTTTGGTGGAATCCGACAACAGAAGACCAAGCTATTGACCGGGCACATCGTATTGGTCAAACTCGACCAGTTACTGTATCGAGGATTACTATAAAAGATACTGTGGAGGACCGGATATTAGCTCTCCAGGAGGAAAAGAGAAAAATGGTGGCATCTGCCTTTGGTGAAGACCGGGTTGGCAGTTCTGCAACTCGACTCACTATAGATGATCTCAGATATATATTCCTGGGAAGTCGAGCTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60153.p1 GENE.R_Transcript_60153~~R_Transcript_60153.p1 ORF type:complete len:1094 (+),score=227.03,SNF2_N|PF00176.19|3.3e-72,Helicase_C|PF00271.27|1.2e-15,zf-C3HC4_3|PF13920.2|2.3e-06,zf-C3HC4_2|PF13923.2|3.7e-06 R_Transcript_60153:324-3605(+)
MPDTEEHLNGFIESTRRFCSLFSEWICSLGNFTNLVKHSSIGSNFRLIEEHRSHSSLFLNRMELIDISSSDSDSILESDDEPQILSSSQNLSAASSSRRKLPDSFSRSHTNSTGPQNLKPHSPNRGSTNRGESLSGGYRYQAGPGPSTSYGTGGQDSSSFISRHEFQSSKENGSTFQSKKDDGRNNRSLPSSFQSSGVRNNIHNGDNRGFYHPVELSSTIYGRDSFSRDREDDVRIHDRHEHNRRILPPPLSRGKSVSSAPYASASDPLQNIGFGEERVTGDERVIFQAALQDLSQPKTELDLPPGTLSIPLLRHQKIALAWMVQKESTVHCLGGILADDQGLGKTISTIALIQEQRSLQRKSQSEEKENHSAVALNLDDDDDDDKGSASLQAVNKTEDPNIATCKSEELCNAKTETLNLDDNDDNGNASSESVKKMENDGGPKRNSGASSSSQNIKRQRPPAGTLIVCPATVLRQWARELDDKVTEEARLSVLVYHGGNRTKDVTELAKYDVVLTTYSIVSNEVPKQPIVDEDDVEPKLGEKYGLSSDFSINKKRKHPFTTSKKGKKGRKLADSSLYGPSGALARVSWFRVVLDEAQTIKNHRTQTARACCGLRAKRRWCLSGTPIQNSVDELYSYFRFLRHGVYSDYKTFCEAIKIPISRDPNIGYKKLQAVLKTILLRRTKDTLLDGEPIISLPPKFVNMKTVTFTGEERAFYAQLEAESRSQFKAYAAAGTVNQNYANILLMILRLRQACDHPLLVKGFNSDSGRRTNLEKARKLPRQVLMDLLRRLEAPSALCLICSDPAEDAVITICRHVFCYQCVADYLTGDDNMCPARCKEQLSDDVLFSEATLRSCLMSDADGNLLNDDGSRKSTSILSSEYSSSKIKAALEILQSHCKANSLCIDLDDFGESETQNSVHALRAHETESSSSQGPIKTIVFSQWTRMLDLFELSLNQHCIQYRRLDGSMTLVARDRAVREFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVSRITIKDTVEDRILALQEEKRKMVASAFGEDRVGSSATRLTIDDLRYIFLGSRAL*

Click here to download the sequence:
Link to NCBI Protein BLAST