Transcript Information: R_Transcript_60192.p1


Annotated TAIR IDAT5G25190.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8707007-8707655 | Reverse length=181
E-Value5.6E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5267647088225
Replicate 27.6433900638278
Replicate 38.7407288195845
Condition 2: 8 Hour
Replicate 19.2358964274697
Replicate 26.8651830214166
Replicate 39.2350299647583
Condition 3: 24 Hour
Replicate 19.7671372854706
Replicate 25.9007490891457
Replicate 312.287834210188


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60192.p1 GENE.R_Transcript_60192~~R_Transcript_60192.p1 ORF type:complete len:228 (+),score=30.75,AP2|PF00847.16|1.3e-10 R_Transcript_60192:105-686(+)
ATGGCTAGACCACAACAACGGTATCGTGGTGTTAGGCAAAGGCATTGGGGTTCTTGGGTTTCAGAGATTCGTCATCCCATTTTAAAAACGAGAATTTGGTTGGGCACATTCGAAACGGCAGAAGACGCAGCCCGGGCCTATGATGAGGCGGCCTGGCTCATGTGCGGGCCTAGGGCCCGGACCAATTTCCCTTACAACCCAAATGCCCCTCAAACCTCCTCCTCTAAGCTTCTTTCAGCCACTCTCACTGCCAAGCTTCATCGCTGTTATATGGCCTCATTGCAGGTCACTAAGAATTCAGCTACGCAAGCTCAACAAAGGGGGCCCAGCCCACAATTCTCGGGCTCGGGCAACAACGTTGTTGCGAAATTAGGGGGCATGAGCAATTGGCCTATTGTTGAGCACGCGCCAACAATGACAAGCCCAATGCCCCCTAAACCCGAGCCCAATTGGGTAATGAAGGTCGAGAATGCCCAACTTGAGCAGCAGCAACAACAACAATTTGAGCCACTTGAGGAGGATCACATTGAGCAAATGATTGAGGAGTTGCTTGGTTATGGTTCGATTGAAATTGCTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60192.p1 GENE.R_Transcript_60192~~R_Transcript_60192.p1 ORF type:complete len:228 (+),score=30.75,AP2|PF00847.16|1.3e-10 R_Transcript_60192:105-686(+)
MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAAWLMCGPRARTNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSATQAQQRGPSPQFSGSGNNVVAKLGGMSNWPIVEHAPTMTSPMPPKPEPNWVMKVENAQLEQQQQQQFEPLEEDHIEQMIEELLGYGSIEIAV*

Click here to download the sequence:
Link to NCBI Protein BLAST