Transcript Information: R_Transcript_60225.p1


Annotated TAIR IDAT3G48770.1
Annotated Gene NameDNA binding;ATP binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18079261-18086817 | Reverse length=1899
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0843744543958
Replicate 23.9958357193647
Replicate 36.3541757691749
Condition 2: 8 Hour
Replicate 16.4674314566542
Replicate 26.4606700129377
Replicate 310.028398485773
Condition 3: 24 Hour
Replicate 110.340281110056
Replicate 27.1736828225407
Replicate 311.789571036656


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60225.p1 GENE.R_Transcript_60225~~R_Transcript_60225.p1 ORF type:complete len:1734 (+),score=313.84 R_Transcript_60225:99-5204(+)
ATGGCTACGGCTGAAGAGCACATAGAGCAGATCAGGAAGAAGAAGTTTTCAATTGGTACTGGGAAGAATCCCCTTAGAAAGGATCTTCGAATGGCTGTTAAGTATCTTTCTACTGAATTGTACTCCAAAGATGTTCACTTCCTCATGGAACTCATTCAGAATGCCGAAGATAATGAGTATCCAGAAGGAGTGGAGCCATCCTTGGAGTTCCTGATAACATCTCAGGACATAACAGCCACGGGGGCGTCTGCAACTTTGCTGATATTCAACAATGAAAAGGGATTTTCTCGAAAGAATATCGAATCCATTTGCAGTGTTGGTGATTCTACCAAAGCTGGCAATAGGAAAAGTGGTTACATTGGAGAGAAAGGTATTGGGTTCAAAAGTGTGTTTCTGTTAACTGTGCACCCATATATCTTCAGTAATGGCTACAGGATCAGGTTTAGTGAAACACCTTGTCCTGAATGCGATATTGCCTACATTGTTCCTGAATGGGTTGAATCCAGACCGTCTGTCTCAGATATTCAGAAAATTTATGGTCAGAGCAGAACCCTTCCAACTACTACATTGATCTTGCCATTGAAGCCTGACAAAGTCCAAGCCGTAAAAGAGCAGCTGTCAAGACTCCATCCCGAGCTTCTGCTGTTTCTCTCGAAGATCAAACGCCTTTCTGTCAAGGAGGAAAACACAAATCCAAATCAGAACATAATTCGAGCAGTTTCTATTTCTAGTGAAATAGATTTTGTTTCAAAGAAGAACATTGATGCGGATTCTTATACAGTCCATTTGTGTGCTAAAGAAGATGGGAATGAAGTAGATGAAGGAGAGTGTCACTACCATATGTGGAGGCAAAGGTTTCCTGTTAAGGAGGAGAATAAAGTCGAGAAAAGGAAGGATATCGAGGAATGGGCTATCACATTGGCTTTTCCATATGGTAAACGTCTAAATAGAGGAATGAGTTCACCTGGTATCTACGCATTCCTTCCCACTGAAGCAGTCACAAACTTGCCTTTCATTATACAGGCGGATTTTCTTCTTCCGTCATCTAGAGAAACTATTTTGTGGGATGATGTATGGAATCAAGGGATCCTCAGCTGTGTTCCTGATGCTTTTATTAACGAATTTGTCTCCCTCATAAGAACAAGGGAAGATGCACCTGTGTCCAGCTTGGCATCAATGTTTTCTTTCTTGCCTATAAATCAGTCGGGTTATCCAAAACTGGAAGCAGTAAGGGAGACAATCAAACAGAAGTTGCTGAGGGAAAATATTATTCCATCGGAGTCACACTCAGACCAGAAGTTCTTCTATAAACCTGGTGAAGTTGGGCGGTTAATGCCTAGTTTCTGGGAAATATTGCTCAAGGCAAAGAGTCAAGGTGCAAAATTGCACAACCTTTCATCTCAGGGGAAGCATATATTAAGCTCTTCATTTGACCTGAATAAGTACAGCAAAGTTCTCAACTTCCTTGGAATTCAGTTCGTTGACAATGAGTGGTATCCAAAATGCATACAGAGTTGCAACCTTGTGTCGGGTGTAGGGGAAGATGTATACAAGGAGCTGCTTCATTTTGTTTCGGAATATTGGAACTCAAACTTTATGGGAACCAGTATGAAGAGTATACCTCTCCTGAAGTACGCTGATGGTTCTGGCAATATCTCACTCTTCAGTATAAATGACGCAAAAAGTCATTATTATACCTTGTGTAGGTCACTGGATGAAAGATACATCTCTTGGCTCATTGATTGGAGCAAGGAATTCAGATCTGCAACTCAACTGTATTTCTTACCAGAGAAGACACAGAAGTTATGCTCAGGTCATACACTACATGTCTGGTTGAGAGATTGTGTGGCTGTTCAGACTCTTAGTGTCAATGAATATGCATCCCGAATTCACAAATCGCTAAATAACAACCGGACCATGGTTTTAGCGTTTGCTCATTTTCTGTATCTCTCCTATTCTAAGGGATATCTGAGTAAGTCAGAGGCTAAAAAACTGTGTCTTGAGATGCCAGTATTGGAAGCTTATGGGGGTGTATCCTCAGGATTGAAGAGAGTGCTTGTTCCTGCGGATGGGAGCAAATGGGTGGAACTGATGGGCTCAAATCCATGGCGATGTAAGGGTTACATAGAGTTGGCTGGTGATTATCTTCATTCAGGGCGATATGCTGGTCAATATGTACACGATAAGGTGCTGATTGACTTTCTTCAGATCTGTGCTGGTGCTTCAGATATCCCTGATTTATGTCCTCCTGACGCTGCCTTTGCTACTGTATCCGGTCCATTGACAAAACAAAATGCATTCTTGTTGTTGGATTGGATTAAGAAGCTAAGATCTAAGGGTATGATAATACCTAACTCGTTTTTGAGCTGTATAAAAAATGGAAGCTGGTTGAAGGTGACAATGAGTGGCTTTTCTGCATACAAACCTCCATCACAGTCATTCATTTTGGATTCCTCATGGGGGAGTTTGCTTCAAAGTGGCTCAGATATGGTTGATATTCCCTTAGTTGATGAAGCATTTTATGACCACAGAATAAGGCATTACGAGGGGGAGCTAAAAGTAATTGGGGTGATGTCTAAGAGTGGACAGGCATGCGAATTTATTGCGAAGAATCTCATGTCCTTGGCTGCCAGTGGTAATTTGACGAGATCCAAGGTCTTAGCAATGCTGAATTTCATCAAATTTTTAAGAGATGAGTATCTTCCAGTGAATGCTTTTATCAACGGCGTAAAGACTTTTAAGTGGGTACAGACCTCATGTGGTGTGAAATCGCCTCTTGATTCTGTTCTCTATGACGCCAGCTGGGAAGCTGCCCTGTCAATCAGTCAGATTCCATTCCTCGATCAAGATTATTACGGGAATGATGATATTCTTGCATACAAGACTGAGCTCAATCTCCTTGGAGTAATGGTGGGATTTAAGGAAAATTATCAGACTATAATTGATCATCTGAAACCTTCAGCAAGCTTGAACTGTCTTACTGCTGAACCTCTCATTTTTGCTCTCAAGTGTATTCGTAATTGTAGCTCATCAGGAAAGCTTGTTGCTGCTCTGAAAGTTGCTAAGTGCTTGAGGACTAACAGTGGATACTTGTCTCCTGGTGAATGTTTCCTATTTGATCAAGAATGGGGCTGCATTTTGGAAGTCTTGGAGGGTTTCCCACTCGTTGATGTTGACTTTTATGGGGGTGAAATATTGAAGTACAAAACTGAGTTGAAGAAAATTGGTCTGGTGGTGGATTTTGATGTTGCAGCTAAGGCATTTTCTGATAAGTTCAAGCGGCAAGCTTCATCGAACTTGATAAATGAAGAGAATGCGCTCGCATTACTTTCGGCTTACAGAAAGTTAAGCAAAGCAGGGCGCCTAATTCCTGCTGAGCTCCTGGCTTGTGTTCGTGAAACAAAATGGTTAAAAACTCGCCTTGGGGTGTGCATGTCACCTAAGGATTGCATTTTATTTGGTCCAGATTGGCAGCCAATTTCTCTGATCACACTGCTTCCTTTCATTGATTTCAGTGATTATAAAGATGAGTTGAAGAGCATGGGAGTTGTGGTTGATTTTACGAAAGGTGCAGACATTGTACTCTCACGTGTGTTTTTCCCTCAAGACCCTGCAGTTATAGCCCCTTGCAGCATTATCTCTTTGCTTCAATGCATTAGAAACTCAAAGCCAGGGGGTGAAAAAACCCTTCCAGAGACTTTCATGAAACAAATTCACCAAACAAAATGGTTGAAGACCACCACATTTGGTTATTTGTCTCCCAAAGAGTGCTTGTTGTTTGATGAAAAGCGAAAGTGTTCTTTGCAGCCTCAGGATGGGCCATTCCTTGATGAAGAGTACTATGGACAACCTTTATCCTCATTCAAGAACGAGCTTGCTACAATTGGGGTCACCGTTGATTTGAGTAGCAAGGATGCAAACTCATTGCTTGCTAACCACTTGAAGTCCTTTTCTGAGTTTGGTAGGATCAAGAGAATTTATGACTCCTTAAACGAATCTGGTTGGAAACCTGTTGATGAATCTCACCAATGGATCTGGATCCCGAGTAGCTCTACTGATGGGATGTGGGTCAGTCCTCAGGAATGTTGCCTGCATGATGACAAGGGTCTCTTCAGTTCCCGTTTGCATGTCTTGGATCGAAATTACAAACCAAAGTTACTCTTCTTCTTCTCAAAAGCCTTTGGGGTAAGGAGCAAACCCTCACTTGATGATTACTGTATGCTGTGGAAAGACTGGGAAAACTCACGGCCTGTTCTATTGCATGAAGAGTGTTGCGCCTTCTGGGGCTATGTTGTTCAGCACTGGAACTCAAAAACCGAGGAAATGATCTCAGAAAGTGCGGCGAAAATCCCTGCTGTGTCTGGTCAGTCGACCGATATTTTGCTGCTTAACAAACAGGATGTTTTTCTCCCCGATGATCTTCTGTTGAAGGAGCTTTTTGTGAAGTCTTCTTCACGCGCATTATTTGTCTGGTTTCCTATGACAGACATGCCATTGATTCCTCGAGCTATACTTTTTAATAAATACTCTAATATTGGTGTTCGGACAATCTCAGGATCTGTAACCATTTCTGAGCTCTCTGATTTGAAAGGTGGAGAACTGAAGCAAGTAAAGCCGAAGGATGGTTACATAGTTAAGGGGCTTGCGATGCTTATCCTTGGAGCTCTAGCTGACCCAGTACTGAGGATAGATGTAAAGTGCAGGCATGAAATGGTTAAAAGACTTCTCGACGTCAGTGTTTTCGAGATGCAAAAGCCAGTTATGATGAGCTACAATTTGAAGGTGACTTCTGGTGATATCATCGAAGTCAGTACATGTCAAATGGTTCGCTGGGAGAGGGACAGTTCAGAGTTTTATGTTCAGAAATTGGATAAAACAGGTAGGCGAAAAAATGTCGTAGAGTATGCAACGAAGTTTGCTCAAGTGGTGTCTGAAGGGCTACTTTGGGAGAAGGAAGATCAGATCCCGAGACTTTCAGAGCTGATCAAGTTCGGGTTTCTGATGGATTTTGAAGAGGATGCTGTTGATTATTTTCTGAAGTCAAAGAATTTGCAGATCTTTGGAGAGGATGAAGAGTTCCTCACTTCTTTCTTCTCCTCTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60225.p1 GENE.R_Transcript_60225~~R_Transcript_60225.p1 ORF type:complete len:1734 (+),score=313.84 R_Transcript_60225:99-5204(+)
MATAEEHIEQIRKKKFSIGTGKNPLRKDLRMAVKYLSTELYSKDVHFLMELIQNAEDNEYPEGVEPSLEFLITSQDITATGASATLLIFNNEKGFSRKNIESICSVGDSTKAGNRKSGYIGEKGIGFKSVFLLTVHPYIFSNGYRIRFSETPCPECDIAYIVPEWVESRPSVSDIQKIYGQSRTLPTTTLILPLKPDKVQAVKEQLSRLHPELLLFLSKIKRLSVKEENTNPNQNIIRAVSISSEIDFVSKKNIDADSYTVHLCAKEDGNEVDEGECHYHMWRQRFPVKEENKVEKRKDIEEWAITLAFPYGKRLNRGMSSPGIYAFLPTEAVTNLPFIIQADFLLPSSRETILWDDVWNQGILSCVPDAFINEFVSLIRTREDAPVSSLASMFSFLPINQSGYPKLEAVRETIKQKLLRENIIPSESHSDQKFFYKPGEVGRLMPSFWEILLKAKSQGAKLHNLSSQGKHILSSSFDLNKYSKVLNFLGIQFVDNEWYPKCIQSCNLVSGVGEDVYKELLHFVSEYWNSNFMGTSMKSIPLLKYADGSGNISLFSINDAKSHYYTLCRSLDERYISWLIDWSKEFRSATQLYFLPEKTQKLCSGHTLHVWLRDCVAVQTLSVNEYASRIHKSLNNNRTMVLAFAHFLYLSYSKGYLSKSEAKKLCLEMPVLEAYGGVSSGLKRVLVPADGSKWVELMGSNPWRCKGYIELAGDYLHSGRYAGQYVHDKVLIDFLQICAGASDIPDLCPPDAAFATVSGPLTKQNAFLLLDWIKKLRSKGMIIPNSFLSCIKNGSWLKVTMSGFSAYKPPSQSFILDSSWGSLLQSGSDMVDIPLVDEAFYDHRIRHYEGELKVIGVMSKSGQACEFIAKNLMSLAASGNLTRSKVLAMLNFIKFLRDEYLPVNAFINGVKTFKWVQTSCGVKSPLDSVLYDASWEAALSISQIPFLDQDYYGNDDILAYKTELNLLGVMVGFKENYQTIIDHLKPSASLNCLTAEPLIFALKCIRNCSSSGKLVAALKVAKCLRTNSGYLSPGECFLFDQEWGCILEVLEGFPLVDVDFYGGEILKYKTELKKIGLVVDFDVAAKAFSDKFKRQASSNLINEENALALLSAYRKLSKAGRLIPAELLACVRETKWLKTRLGVCMSPKDCILFGPDWQPISLITLLPFIDFSDYKDELKSMGVVVDFTKGADIVLSRVFFPQDPAVIAPCSIISLLQCIRNSKPGGEKTLPETFMKQIHQTKWLKTTTFGYLSPKECLLFDEKRKCSLQPQDGPFLDEEYYGQPLSSFKNELATIGVTVDLSSKDANSLLANHLKSFSEFGRIKRIYDSLNESGWKPVDESHQWIWIPSSSTDGMWVSPQECCLHDDKGLFSSRLHVLDRNYKPKLLFFFSKAFGVRSKPSLDDYCMLWKDWENSRPVLLHEECCAFWGYVVQHWNSKTEEMISESAAKIPAVSGQSTDILLLNKQDVFLPDDLLLKELFVKSSSRALFVWFPMTDMPLIPRAILFNKYSNIGVRTISGSVTISELSDLKGGELKQVKPKDGYIVKGLAMLILGALADPVLRIDVKCRHEMVKRLLDVSVFEMQKPVMMSYNLKVTSGDIIEVSTCQMVRWERDSSEFYVQKLDKTGRRKNVVEYATKFAQVVSEGLLWEKEDQIPRLSELIKFGFLMDFEEDAVDYFLKSKNLQIFGEDEEFLTSFFSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST