Transcript Information: R_Transcript_6041.p1


Annotated TAIR IDAT4G37890.1
Annotated Gene NameZinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)EDA40
Annotation TypeOrtholog
Chromosome Positionchr4:17812812-17815031 | Reverse length=739
E-Value3.4E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.412966116788
Replicate 27.9388996598938
Replicate 38.3193624105429
Condition 2: 8 Hour
Replicate 19.5831909246266
Replicate 211.940636737748
Replicate 311.408723756429
Condition 3: 24 Hour
Replicate 112.982773241537
Replicate 29.1805472330595
Replicate 310.853107299142


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6041.p1 GENE.R_Transcript_6041~~R_Transcript_6041.p1 ORF type:5prime_partial len:603 (+),score=26.23,VWA_3|PF13768.2|9e-12,VWA_3|PF13768.2|8.9e+03,VWA_2|PF13519.2|7.2e-10,VWA|PF00092.24|4.9e-09,zf-RING_11|PF17123.1|2e-06 R_Transcript_6041:1-1809(+)
GTTTTGTTACAATGCTCTTCAACAACACCATCATCACCTCGTTCACCATCCACTTTCTCTCTCCTCAAGAACACCCTCCGCCTCTCCAAGGTCACTCGGTGTGGCGTTTGTGCTCATAATGTTAAGTCAGCTCAAGGCACCGCCATCTTCACCGCTGAATGCTCCCACTCTTTTCACTTCCCTTGTATTGCTTCCTACGCTGCTAAGACCAGCACCACCAATGGCGTGTCTCTGCATACGTGTCCTCTCTGCGGGGCCCACTGGAAGGAGGCTCCACTCCTTGCTGTCCCCACTACTGTCGTCAAGAAGAAATCTCCGCCGTCCGATCTCCGACTCTACGACGACGACGAGCCCTTGATGTCTCCGGTTTCCGGAATCCGGTTCAACCCGATTCCTGAGTCCGAAGAGGAAGCTGAAACCGATACCGACACGGATACGGAGTTCCCCGGATTCTTCTCTGATCCGGTGACACCTCGCCGTAATTACATCAACGAATTCGCGAACTTCAAAGGAGTCGAAGTCAGAATCTCGCCGGAAGCGGCCGTCGTCTCCGTCGGCCGGAGTTACGAGACCTACGCGGTTCTTCTCACAATCAAATCCCCGCCGGCACCGGTTGGTTCTAGACGGACGTCGGTGGACCTCGTGACGGTGCTCGACATCGGAGGTGACATGACCCCGGCGAAACTAATGGCACTGAAGAGAGCCATGAGAGCGGTGGTATCTTCTCTCTCATCCAACGACCGTCTCTCAATTGTGGCCTTCTCATCAGGGTCAAAACGCCTTCTTCCGTTAAGAAGAATGACTCCTTCGGGGAGACGATCGGCGAGGAGGATAATCGAAACGCTAAACCTGGGTCAAGGATCTTGCCTAAACGACGCGTTGAGGAAGGCTGCGAAAGTGCTTCAAGATCGTAAAGAGAAGAATCATTTCGCCAGTATAATTTTGCTTAATGGCCAGAGTCATCATCAAAGCCAAAGCCATCAGTTTGAGGTCGTGTCATCCACGCGCTTCTCACACATGGAAATCCCAGTCCACACTTACAGAGTCGGAGAGGACATAAACGACGACGTTTTTATAAAGTCGGTAAACAGCTTCTTAAGCGTCGTCGTTTTGGACCTCCGAATCCAGCTCGGATTAGCCTCCGGTTCAGCTCCGGCCGAGATAGCAGCGGTTTACTCCTGCACGGGACGGCCGGGGTTACTGAGTCAGGCGTTATCGAAAATCGGGAATATGTACAGCGAGGAGGAGAGAGAAATGTTGATAGAGTTGAAAGTTCCAGCAGCTTCGATTGGGTGTAACCACCTGATGTCCGTACGATCATACCACAAGGAGCCAACCACAAAGCAGATGGTGTACGGGAGGGACCACTCAGTGATAGTGCCACGTCCTCACACCATCCGATCGTCGGATCCCAGCATCCAACGGCTGAGAAGCTTGTTTGTGATGACACGAGCTGTGGCTGAGAGCAGGAGATTATTAACGGAACGGAATGATTTGAGTGGGGCCGAGAGGCTCCTGGGGTCGGCTAGAGCCGTGTTGGGCCAGCCGAGCTTGATGATTCAAGCCGCTGATGAGTATCGCAGGAGAGTCGAGGCTGAGCTGGCGGAGGTCAGGTGGCGGCGACAGGAGGAGAAGCGGAGGAGAGAGAAAGATGGTGGTGGTGGGTGTTGTATGGTGGATGAGAAAGGGGAGCCGTTAACGCCGACATCGGCTTGGAAAGCGGCTGAGCGGCTGGCTAAAGTCGCCATGATGAGGAAGTCGTTGAATCGTGTCAGCGACTTGCACGGCTTCGAAGACGCTCGCTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6041.p1 GENE.R_Transcript_6041~~R_Transcript_6041.p1 ORF type:5prime_partial len:603 (+),score=26.23,VWA_3|PF13768.2|9e-12,VWA_3|PF13768.2|8.9e+03,VWA_2|PF13519.2|7.2e-10,VWA|PF00092.24|4.9e-09,zf-RING_11|PF17123.1|2e-06 R_Transcript_6041:1-1809(+)
VLLQCSSTTPSSPRSPSTFSLLKNTLRLSKVTRCGVCAHNVKSAQGTAIFTAECSHSFHFPCIASYAAKTSTTNGVSLHTCPLCGAHWKEAPLLAVPTTVVKKKSPPSDLRLYDDDEPLMSPVSGIRFNPIPESEEEAETDTDTDTEFPGFFSDPVTPRRNYINEFANFKGVEVRISPEAAVVSVGRSYETYAVLLTIKSPPAPVGSRRTSVDLVTVLDIGGDMTPAKLMALKRAMRAVVSSLSSNDRLSIVAFSSGSKRLLPLRRMTPSGRRSARRIIETLNLGQGSCLNDALRKAAKVLQDRKEKNHFASIILLNGQSHHQSQSHQFEVVSSTRFSHMEIPVHTYRVGEDINDDVFIKSVNSFLSVVVLDLRIQLGLASGSAPAEIAAVYSCTGRPGLLSQALSKIGNMYSEEEREMLIELKVPAASIGCNHLMSVRSYHKEPTTKQMVYGRDHSVIVPRPHTIRSSDPSIQRLRSLFVMTRAVAESRRLLTERNDLSGAERLLGSARAVLGQPSLMIQAADEYRRRVEAELAEVRWRRQEEKRRREKDGGGGCCMVDEKGEPLTPTSAWKAAERLAKVAMMRKSLNRVSDLHGFEDARF*

Click here to download the sequence:
Link to NCBI Protein BLAST