Transcript Information: R_Transcript_60562.p1


Annotated TAIR IDAT5G53500.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21726167-21728524 | Reverse length=654
E-Value1.1E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7676962640145
Replicate 21.5520277853052
Replicate 32.651686499973
Condition 2: 8 Hour
Replicate 12.1856281124459
Replicate 22.931552152122
Replicate 34.0252525643536
Condition 3: 24 Hour
Replicate 12.9777908956436
Replicate 21.8148678863934
Replicate 33.0526784779494


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60562.p1 GENE.R_Transcript_60562~~R_Transcript_60562.p1 ORF type:complete len:717 (+),score=119.94,WD40|PF00400.28|0.00044,WD40|PF00400.28|4.1e-06,WD40|PF00400.28|0.00032,WD40|PF00400.28|5.4e+03,WD40|PF00400.28|2.7e+02,WD40|PF00400.28|1.2,WD40|PF00400.28|62 R_Transcript_60562:619-2769(+)
ATGGATGCCTACATTGATCATGGTGAAAACCAATTTTTTGATGCCGTTGAAGATATTGCTGAATTGTCCGATTCGAGTTCAGATGGCCAGGAGAATCTTTATGGTTCAGGAGGGCGCAATTCGCCCTCAAGGAATGCTAAATTTGATGTGTGGATACAAAATCTAGAAAGTGTTGAAGCCCGGCGAAGTAAATTCTTTAATTTGTTGGGGTTTGATGTAAATAATAAGATTTCTGGTGATGATTCTGAAGATGGTTGTGATTTTGGAGGAGAGGTTAATAGGATTACAAGTAGTAGTGGGGCTGTGCTTAGGAGGAGCCCAAGTTTTGAATTTGAGTTCTCGTCAAGTAGGTCTTCGATGTCATTCTGCTCGGTTGATGTATCAGAGTTATCTGGGAATTTAATTACTAAGGAGAAGGAGAACATTGTCTGCAACATTGAGAATGTGGATGGGGGGCGGGGACTTGAGAGCAATGCGGGTGATCGTAACAGAGAATTAGATTCGGGCATCTCAGTCACCGGTGAACATCCTGAATGCAGTTCGAGTTCTTCTTCTAGTGGAGAATTCTCACCCGTGAAAAACATGTCTAGAAGCCGTTCTGCTGGACAGACAAAGAGGGTAAAGAAATGGTGGTTGAGTAGATTGCGTAGCTTCACTTGTGTTGTGGAAGGGGGAGAGGAATCGTGCCATTGTGAATCAAACCCAGGGTCGAAGATTCAGAGAGTGAAGGTTCATCAATCAAAGAAACAATCTAAGGAACTTTCAGCTCTTTTCTATGGTCAAAACATCCAAGCCCACAAGGGTGCAATCTTGACGATGAAATTCAGCCCTGATGGCCAATTCCTAGCTAGTGCTGGAGAAGACAGAATAGTGCGCATGTGGCGGGTTGTGGAGGATGATCGAATGAATGAGCGTGATATCCCTGACATGGATCCATCATGTGTCTACTTTACAATGAATCATCTTTCTGAATTAAAACCCCTGAGCATGGATAGAGAAAAGAATGGTAAATTGAGGAGAAATTCTGACTCAGCTTGTGTGATTCTCCCACTGAAGGTCTTCCGAATTTTGGAGAAGCCATTACATGAATTCCGAGGCCACACCAGTGAAATATTGGATCTTTCATGGTCGAATAATAATTGTCTGCTATCATCATCAGTGGATAAAACTGTTCGTTTGTGGCGAGTTGGATTCCCACATTGCCTCAAGGTCTTCCCGCATAATAATTATGTGACATGCGTTCAGTTTAATCCTCTAAATGATAATCACTTCATTAGCGGGTCAATAGATGGAAAGGTTCGAATATGGGAAATATCTTGTTGCAAAGTTGTTAATTGGATTGAGATCAAAGACATAGTTACTGCTGTCTGTTACCACCCTGATGGCCAGGGAGGAATCATCGGCTCGATTACAGGCAGTTGTCGCTTTTATAGCATAGCAGATAATCAGTTGCATCTAGATGCTCAGATCTTCTTGCGTAACAAAAAGAAATCTTCTGGGAAAAGAGTAACTGGCTTCCAGTTCTTCCCTCAAGACCCAAGCAAAGTCATGGTCTCTTGTGCTGATTCACAAGTTAGAATAATTCAAGGAGTGAATGTGATTGGCAAATATAAGGGTCTTCGGAGCACTGGATCTTATTGCTCAGCCTTTTTTACATCTGATGGGAAGCATATAGTCTCTGCATCTGAGGATTCCAATGTATACATATGGAAGTGTGCTGATCAAGATTATGGACACCCATCACAGATAAAGAAGGTCAAGTCTTTTGAGAGATTTATTTCCAATGCATCTGTTGCGATGCCCTGGCCAGGATTGCAAAAAGGGAGCAGAGGAAATAGGTTGCAAAATGGTACCCTTGGTGGTGTAACTCAAGGGGTGCGCTCGTTCTTTTCACCTTCCCATTTCTCATGCGGGCAAGATTTCTTTGTAGAGTCATGTCCTCCAAAAGGATCGGCATTATGGCCAGAGGAAAAGCTTCTCGCCCGAAGCCCTTTGAGCTCAACATCATCAATACACAAATCTGAGTACAAATTCCTGAGAACCTGTCAGAGCAGATTAGATTCAGACACTTGGGGTATGGTCATTGTGACTGCTGGCTGGGATGGACAGATCAGGTCCTTCCACAACTACGGATTACCAGTACCCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60562.p1 GENE.R_Transcript_60562~~R_Transcript_60562.p1 ORF type:complete len:717 (+),score=119.94,WD40|PF00400.28|0.00044,WD40|PF00400.28|4.1e-06,WD40|PF00400.28|0.00032,WD40|PF00400.28|5.4e+03,WD40|PF00400.28|2.7e+02,WD40|PF00400.28|1.2,WD40|PF00400.28|62 R_Transcript_60562:619-2769(+)
MDAYIDHGENQFFDAVEDIAELSDSSSDGQENLYGSGGRNSPSRNAKFDVWIQNLESVEARRSKFFNLLGFDVNNKISGDDSEDGCDFGGEVNRITSSSGAVLRRSPSFEFEFSSSRSSMSFCSVDVSELSGNLITKEKENIVCNIENVDGGRGLESNAGDRNRELDSGISVTGEHPECSSSSSSSGEFSPVKNMSRSRSAGQTKRVKKWWLSRLRSFTCVVEGGEESCHCESNPGSKIQRVKVHQSKKQSKELSALFYGQNIQAHKGAILTMKFSPDGQFLASAGEDRIVRMWRVVEDDRMNERDIPDMDPSCVYFTMNHLSELKPLSMDREKNGKLRRNSDSACVILPLKVFRILEKPLHEFRGHTSEILDLSWSNNNCLLSSSVDKTVRLWRVGFPHCLKVFPHNNYVTCVQFNPLNDNHFISGSIDGKVRIWEISCCKVVNWIEIKDIVTAVCYHPDGQGGIIGSITGSCRFYSIADNQLHLDAQIFLRNKKKSSGKRVTGFQFFPQDPSKVMVSCADSQVRIIQGVNVIGKYKGLRSTGSYCSAFFTSDGKHIVSASEDSNVYIWKCADQDYGHPSQIKKVKSFERFISNASVAMPWPGLQKGSRGNRLQNGTLGGVTQGVRSFFSPSHFSCGQDFFVESCPPKGSALWPEEKLLARSPLSSTSSIHKSEYKFLRTCQSRLDSDTWGMVIVTAGWDGQIRSFHNYGLPVPH*

Click here to download the sequence:
Link to NCBI Protein BLAST