Transcript Information: R_Transcript_6071.p1


Annotated TAIR IDAT3G59040.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21821495-21823919 | Reverse length=590
E-Value2.1E-264
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.786810933883
Replicate 29.0090508878442
Replicate 311.372139232132
Condition 2: 8 Hour
Replicate 19.2907359906214
Replicate 213.955727673931
Replicate 314.772321409145
Condition 3: 24 Hour
Replicate 112.537242244916
Replicate 210.40194834201
Replicate 314.320147215364


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6071.p1 GENE.R_Transcript_6071~~R_Transcript_6071.p1 ORF type:complete len:564 (+),score=136.28,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|6.2e-11,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|3.4e-05,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|9.3e-09,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|2.1e-05,PPR|PF01535.16|0.0014,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.2,PPR|PF01535.16|0.012,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.1e-07,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|16,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.00067,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.0089,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|35,PPR_1|PF12854.3|7.6e+02,PPR_1|PF12854.3|42,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|3.2e-05,PPR_1|PF12854.3|0.0083,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|0.34,TPR_14|PF13428.2|6.6e+02,TPR_14|PF13428.2|9.3e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|9.5e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.4e+04,TPR_16|PF13432.2|1.1,TPR_16|PF13432.2|9.8,TPR_16|PF13432.2|9.4,TPR_16|PF13432.2|5.4,TPR_16|PF13432.2|1.1e+04,TPR_19|PF14559.2|98,TPR_19|PF14559.2|0.29,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|4.6e+02 R_Transcript_6071:198-1889(+)
ATGCCTCATGCCTTAATTTTGAAGCCTTTCATTTCTGTCCCACCTTCATTTTCGTTCAGAAAGCAGGATGCACATGGAAACTTGTGTGATATCACCTTTAACAAGTACAAAAAGCTACAGGTTGTTTGTCTTGGTATGTTGGCGCCAAGAAAGTTTATGCAGAAGAGGAAGAAAGTTGAACATTTCAAAGATGCAGCTGATGAAGCAGATCAGAAGAACTGGAGAAGACTGATGCAAGAAATCGAGGAAACAGGTTCTGCAGTTTCAGTTTTGAGAAACCGAAGGGCTTCCAGTGATACTCTTCCTAAAGACCTTGTTGTGGGAACATTGGTTAGATTAAAGCAGTTGAAGAAATGGCATCTTGTTAGTGAGATTCTTGAATGGCTCAGGACTCAGCATTGGTGGGACTTCAATGAGATGGATTTTTTGATGCTTATCACAGCTTATGGAAAACAAGGGAATTTCACAAAAGCGGAGAAGGTGTTGGGCTACATGAACAAGAAGGGCTTTCCTCCAAATGTGGTATCCTACACTGCTCTTATGGAGGCATATGGAAGAGGTGGCCAATACAATAACGCTGAGGCTGTGTTTAGAAGGATGCAGACTTTAGGCCCTGAACCTTCTGCTGTAACCTATCAACTAATCCTCAAGATATTTGTTGAGGGGGGCAAGTTTAAGGAGGCTGAAGATATTTTTCTTGATCTAATGAATGATGAGAAATCGCCTTTGAAGCCAGATCAGAAAATGTTCCATATGATGATATATATGCATAAGAAGGCTGGAAGCTATGAGAAGGCTCATAAACTCTTCTGCCTGATGGCTGAACGAGGAGTTGAATGGTCTACTGTCACTTTCAATAGTCTAATGTCATTTGAAACCAATTATAAGGAAGTTTCCCGCATATATGACCAGATGCAAAGTGTGGGGCTCAAACCAGATGTTGTGAGTTATGCCTTACTCATCAATGCTTATGGGAAAGCTAGACGAGAGGAGGAGGCATTAGCAGTTTTTGAGGAGATGTTAGATGCAGGTGTTAGGCCAACACATAAAGCTTACAATATACTACTTGATGCTTTTGCTATCTCGGGAATGGTGGAGCAAGCGCAGACTGTGTTCAAGTGCATGAGACGGGATAGGCTTATCCCAGATCTCTGCTCTTATACAACAATGTTGTCAGCATACATTAATGCATCTGACATGGATGGAGCTGAAAATTTTTTCAAGAGATTGAAACAAGACGGCCTTGAACCCAATGTTGTCACTTACGGGACATTGATGAAAGGCTATGCAAAAGTAAGTGATTTGGAAAAGATGATGGAAAAGTATGAAGAAATGATAACACGTGGGATCAAAGCAAATCAAACTATTTTCACCACAATTATGGATGCATATGGTAAGAACGGAGATTTTGGCAGTGCTTTGTTTTGGTTTAAGGAGATGAAAGGTCATGGATGCTCTCGTGATCAAAAGGCAAAGAATGTCCTCCTTTCACTGGCTCAAACAGAAGAAGAACGGGAGGAAGCTAATCAACTGCTGAAAACTAAGACAAGTGATCAACCTTGTAGGTTTTCTGATTATAATAGTGATGATGATGAAGATGGTACAGGTGACAGTGACTATTCTGGCGATGATGAGAGGATATCATCCGAAAGTCATGAAGAACAGGATGAGTTAATACTCAGCCGAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6071.p1 GENE.R_Transcript_6071~~R_Transcript_6071.p1 ORF type:complete len:564 (+),score=136.28,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|6.2e-11,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|3.4e-05,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|9.3e-09,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|2.1e-05,PPR|PF01535.16|0.0014,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.2,PPR|PF01535.16|0.012,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.1e-07,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|16,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.00067,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.0089,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|35,PPR_1|PF12854.3|7.6e+02,PPR_1|PF12854.3|42,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|3.2e-05,PPR_1|PF12854.3|0.0083,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|0.34,TPR_14|PF13428.2|6.6e+02,TPR_14|PF13428.2|9.3e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|9.5e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.4e+04,TPR_16|PF13432.2|1.1,TPR_16|PF13432.2|9.8,TPR_16|PF13432.2|9.4,TPR_16|PF13432.2|5.4,TPR_16|PF13432.2|1.1e+04,TPR_19|PF14559.2|98,TPR_19|PF14559.2|0.29,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|4.6e+02 R_Transcript_6071:198-1889(+)
MPHALILKPFISVPPSFSFRKQDAHGNLCDITFNKYKKLQVVCLGMLAPRKFMQKRKKVEHFKDAADEADQKNWRRLMQEIEETGSAVSVLRNRRASSDTLPKDLVVGTLVRLKQLKKWHLVSEILEWLRTQHWWDFNEMDFLMLITAYGKQGNFTKAEKVLGYMNKKGFPPNVVSYTALMEAYGRGGQYNNAEAVFRRMQTLGPEPSAVTYQLILKIFVEGGKFKEAEDIFLDLMNDEKSPLKPDQKMFHMMIYMHKKAGSYEKAHKLFCLMAERGVEWSTVTFNSLMSFETNYKEVSRIYDQMQSVGLKPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAQTVFKCMRRDRLIPDLCSYTTMLSAYINASDMDGAENFFKRLKQDGLEPNVVTYGTLMKGYAKVSDLEKMMEKYEEMITRGIKANQTIFTTIMDAYGKNGDFGSALFWFKEMKGHGCSRDQKAKNVLLSLAQTEEEREEANQLLKTKTSDQPCRFSDYNSDDDEDGTGDSDYSGDDERISSESHEEQDELILSRT*

Click here to download the sequence:
Link to NCBI Protein BLAST