Transcript Information: R_Transcript_60796.p1


Annotated TAIR IDAT4G02260.1
Annotated Gene NameRELA/SPOT Homolog 1
Annotated Gene Symbol(s)RSH1, AT-RSH1, ATRSH1
Annotation TypeOrtholog
Chromosome Positionchr4:985451-991178 | Forward length=884
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3121826827398
Replicate 24.8415571064233
Replicate 35.7598633353014
Condition 2: 8 Hour
Replicate 15.4476084239526
Replicate 26.2185534668419
Replicate 36.8988740248979
Condition 3: 24 Hour
Replicate 16.4909675128155
Replicate 25.6224298446431
Replicate 36.3913112179584


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60796.p1 GENE.R_Transcript_60796~~R_Transcript_60796.p1 ORF type:complete len:863 (+),score=143.40,HD_4|PF13328.2|1.6e-44,RelA_SpoT|PF04607.13|3.7e-20,TGS|PF02824.17|1.9e-19,HD|PF01966.18|4.2e-13,HD|PF01966.18|6.9e+03 R_Transcript_60796:273-2861(+)
ATGGCGTCTGTTCCATCCTTGTCAGTATCAGTTGAATGTGTGAGCATATGTAATGTAAAGTCATTGAGGTACGATTGTACAGTGCTTTCTTGCGCTTGGAAGGCTCCTAGGGTTCTCTCCGGTTCTCTTGCCAGTACTCCTTCTTCATCTTCTTCCTCTTGTCCTCATTCAAGTTTCAATCGCCGCAAATGTACATGCAAGGCTCTTGATATCGAAATCAGTAACTGGTTAGAACCGTCCTGCATCCTAGGTGCTGGCTGGGTCTTTAGGCCAAGCCCTCTGCGTCGAACTTCTAAAAGGTGGAAATGGTGTTGTTCCTCAGCTTTTGATTCTGAATCTTCTGGTGATGTGACAGCTGAAAGTCTGTGGGAGGATCTTAAGCCAACCATCTCCTACCTGCCTCCTAATGAACTTGAACTGGTTCTAAAAGCCCTCAAGCTTGCGTTTGAAGCTCATGATGGTCAAAAACGACGTAGTGGAGAGCCCTTTATCATTCATCCAGTGGAAGTTGCACGCATATTAGGAGAATTAGAATTGGATTGGGAATCTATCGCTGCTGGATTACTACATGATACCGTTGAGGATACAAATGTTGTAACTTTTGAGCGTATTGAGAAGGATTTTGGTTCTACTGTCCGTCACATTGTGGAAGGAGAGACCAAGGTATCAAAGCTGGGGAAACTTAAATACAAAAATGAAAACAGTTGTGTGCAAGACGTTAAAGCAGATGACCTACGACAGATGTTTCTGGCAATGACAGAGGAGGTTCGCGTGATTATTGTTAAATTAGCTGATAGATTGCACAACATGCGTACTCTTTCACACATGCCTCCTCATAAGCAGGCAAGTATTGCATTGGAGACACTGCAAGTGTTTGCCCCTTTAGCAAAGCTGCTTGGCATGTACCAAATTAAGTGTGAACTCGAGAATCTGTCCTTCATGTACACAAACCCCCATGATTATGATAAGATCACTAAAAAGGTTGCTGGCTCGTATGAGGAACATGAAAGAGAACTCATTGAGGCAAACAATATATTGATGAAAAAGATTGAGGACGACCAGTTGTTGGACATTACAACAGTGAGAACTGAAGTACGCGCTGTATGTAGGGAGCCATACAGTATCTATAGAGCTGTAACCAAAGCAAATGCTTCAATTAATGAGGTCAACCAGATTGCGCAGCTTCGTATTATCATAAAGCCAAAGTCTTGCTCAGGAATTGGACCCCTATGTAGTGCGGAGCAGATATGCTACCATGTTCTTGGGCTCGTTCATAGCATATGGACCCCTATTCCTCGTTCTATGAAAGACTACATTGCAACTCCAAAGCCTAATGGCTATCAAAGTCTGCATACAACTGTCATTCCATTTCTTTATTCGAGCATGTTCCGGCTGGAAGTTCAGATCAGAACAGAAGAAATGGATCTGATAGCTCAAAGAGGCATTGCTGTTTACTATTGTGGGAAAGTGTTTGTCGATGGTTTTGCCGGCAATACAAGGCCTAGGAATTCAAGAGGGAAATCAGTTTGCCTTAACAACAACAATATTGCTCTCCGGATTGGCTGGCTTAATGCAATCCGAGAATGGCAAGAAGAATTTGTTGGCAACATGAGTTCTAGAGAATTTGTGGATGTCATCACTAGGGATCTGTTAGGAAGCCGTGTCTTTGTGTTTACCCCGCAGGGAGAGATAAAAAATCTGCCGAAGGGAGCAACAGTTGTTGACTATGCGTATATGATACACACAGAAATTGGCAACAGAATGGTGGCTGCTAAGGTCAATGGGAATCTTACTTCGCCAACGCATGTACTTGCCAATGCAGAAGTTGTAGAAATAATAACCTATAATGCTCTCTCAAGTAGATCTGCCTTTCAGAAGCACAAGCAGTGGTTACAGCATGCGAAAACCCGCAGTGCTCGACATAAGATTATGAAATTTCTAAGGGAGCAAGCTGCAGAATCTGCTGAAGAAATCACTGCAGATTCAGTCACCCACTTTATTGCTGACTCTGAAAGGGAAAGTGAATTAGCCGAGCACCCTGAATTTTCTAGGATAAGCAAGACAATTTCAGAAAAAACTTCAAAGCCTTTTTCACCATCAAGATATGCTGAAGATGTCCACCTACAGAATGGTAGTCTTTGTGTCCCAAAGGTCAATGGTAAACACAATAAGCATGTTGAGCTTTTGAAGGAGAAAGGGAAATTATTGTCTCAAGAGGCTGATATTGCCAAAATGATATTTGCCAACACTCTAAGGCCCAAGGAAATGCTGCCTGGTTTGGAAAGTTGGCAAACCAGCAAGATTGCAGCTTGGCACATGCTGGAAGGAAACTCTATTCAATGGCTCTGTGTAGTTGGTATTGATCGGAAAGGCATAATGGGTGAAGTAACGACAGTATTGTCTTCTCTAGGGATCTCCGTATGTGCCTGCGTGGCTGAAATTGATAGAGGGAAGGCCATGGGAGTCATGTTGTTTCACATTGAAGGGAGTGTGAACAATTTGGTTGACGCGTGTTCAAGAATTGATCTAATACCTGGTGTTCTTGCATGGTCATTGGGTTGCAGTTGGCTGAGCTCTACCGAGCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60796.p1 GENE.R_Transcript_60796~~R_Transcript_60796.p1 ORF type:complete len:863 (+),score=143.40,HD_4|PF13328.2|1.6e-44,RelA_SpoT|PF04607.13|3.7e-20,TGS|PF02824.17|1.9e-19,HD|PF01966.18|4.2e-13,HD|PF01966.18|6.9e+03 R_Transcript_60796:273-2861(+)
MASVPSLSVSVECVSICNVKSLRYDCTVLSCAWKAPRVLSGSLASTPSSSSSSCPHSSFNRRKCTCKALDIEISNWLEPSCILGAGWVFRPSPLRRTSKRWKWCCSSAFDSESSGDVTAESLWEDLKPTISYLPPNELELVLKALKLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEKDFGSTVRHIVEGETKVSKLGKLKYKNENSCVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQASIALETLQVFAPLAKLLGMYQIKCELENLSFMYTNPHDYDKITKKVAGSYEEHERELIEANNILMKKIEDDQLLDITTVRTEVRAVCREPYSIYRAVTKANASINEVNQIAQLRIIIKPKSCSGIGPLCSAEQICYHVLGLVHSIWTPIPRSMKDYIATPKPNGYQSLHTTVIPFLYSSMFRLEVQIRTEEMDLIAQRGIAVYYCGKVFVDGFAGNTRPRNSRGKSVCLNNNNIALRIGWLNAIREWQEEFVGNMSSREFVDVITRDLLGSRVFVFTPQGEIKNLPKGATVVDYAYMIHTEIGNRMVAAKVNGNLTSPTHVLANAEVVEIITYNALSSRSAFQKHKQWLQHAKTRSARHKIMKFLREQAAESAEEITADSVTHFIADSERESELAEHPEFSRISKTISEKTSKPFSPSRYAEDVHLQNGSLCVPKVNGKHNKHVELLKEKGKLLSQEADIAKMIFANTLRPKEMLPGLESWQTSKIAAWHMLEGNSIQWLCVVGIDRKGIMGEVTTVLSSLGISVCACVAEIDRGKAMGVMLFHIEGSVNNLVDACSRIDLIPGVLAWSLGCSWLSSTEP*

Click here to download the sequence:
Link to NCBI Protein BLAST