Transcript Information: R_Transcript_60837.p1


Annotated TAIR IDAT3G46870.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17263011-17264022 | Forward length=257
E-Value1.6E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6633322701452
Replicate 29.5718428368418
Replicate 39.6006179630933
Condition 2: 8 Hour
Replicate 111.252695288256
Replicate 212.577996035667
Replicate 39.6764100733681
Condition 3: 24 Hour
Replicate 110.381655474293
Replicate 29.243748211492
Replicate 39.6563403030429


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60837.p1 GENE.R_Transcript_60837~~R_Transcript_60837.p1 ORF type:complete len:272 (+),score=56.87,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|1.3e-06,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|0.0047,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.094,PPR|PF01535.16|0.011 R_Transcript_60837:434-1249(+)
ATGGTGAAGTCATTAAAGAGTAGTCATCTGATGTTAACTCGAATACTTTCAAGGGCGAGATCTCCATCTTCAGCCTCTACAATCCTTTCACACTTGAGTGTAACTTTACCCGTTGACCAGCCTTTAAACCCATTGTTGCTGAACCCCAAAGCACTAAGGTCTGAGCCCAATTCGTCTGCAAATGGGATTTTCTTATATTGCAGGAGAGATTATCATGATGGCAGACCAAGGGGGCCCCTTTGGCGGGGAAAAAAGTTGATCGGCAAAGAGGCTCTTTTTGTGATTTTGGGTATGAAGAGGTTTAAGGATGATGAAGAGAAGCTTGCTCAGTTCATTAAAAATCATGTGCTGAGACTGTTAAAGTGGGATATGATTGCTGTCCTAACAGAACTTGAGCGCCAAGAGGAGGTTGCGTTGTCCCTTAAGATTTTCAGGGTGATTCAAAAGCAGGATTGGTATCAGCCTGATATTTATCTCTACAAAGACTTGATTATTGCATCAGCAAGAAATAAAAGAATGGATGATGTGACCCATTTGTGGGACGAGATGAAAAAGGCAAATTTGTTTCCAGATTCTCAAACATATACAGAGGTGATTAGGGGCTTCTTAAGGGACGGTTCGCCTGCAGATGCAATGAACATATATGAGGACATGCTGAAGTCTCCAGATCCACCAGAGGAACTTCCGTTTAGGATTTTATTGAAGGGACTTTTGCCTCATCCCCTTCTGAGGAACAAAGTCAAGAAGGATTTTGAGGAGCTCTTTCCTGAGCACTCAGTTTATGATCCTCCAGAGGAGATATTTGGGGTGCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60837.p1 GENE.R_Transcript_60837~~R_Transcript_60837.p1 ORF type:complete len:272 (+),score=56.87,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|1.3e-06,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|0.0047,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.094,PPR|PF01535.16|0.011 R_Transcript_60837:434-1249(+)
MVKSLKSSHLMLTRILSRARSPSSASTILSHLSVTLPVDQPLNPLLLNPKALRSEPNSSANGIFLYCRRDYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLAQFIKNHVLRLLKWDMIAVLTELERQEEVALSLKIFRVIQKQDWYQPDIYLYKDLIIASARNKRMDDVTHLWDEMKKANLFPDSQTYTEVIRGFLRDGSPADAMNIYEDMLKSPDPPEELPFRILLKGLLPHPLLRNKVKKDFEELFPEHSVYDPPEEIFGVR*

Click here to download the sequence:
Link to NCBI Protein BLAST