Transcript Information: R_Transcript_60914.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.999312832935
Replicate 25.5694411902387
Replicate 33.7640179148607
Condition 2: 8 Hour
Replicate 12.701492142067
Replicate 24.1467363038818
Replicate 31.0652353650462
Condition 3: 24 Hour
Replicate 13.9340843371418
Replicate 23.624103573569
Replicate 32.8258773656792


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60914.p1 GENE.R_Transcript_60914~~R_Transcript_60914.p1 ORF type:complete len:426 (+),score=94.59,Transposase_24|PF03004.10|3.8e+03,Transposase_24|PF03004.10|1.1e-15,Transposase_24|PF03004.10|2e+03 R_Transcript_60914:539-1816(+)
ATGTTTATGGACAAGAAGATGGACTTGAATCTAGGAAAGACAGTTGCGAGGTGCCTAGGGAGCTTGTTGAGTTGGCGAAAGATGCGGAGGCTGAGTTGCATCCTAAAAGTAAGACATTTAAGAGCATGCAGTGACATGATGGCAACCCCTGCTACTTCTGGTCAGCACCATTCTGATGTTTTGCAAGAAGATTCCCAGTCGACTTTAACTTATCGGCAGAAGCGGAGGCTTAACAAATCAAAAAGAAAAGGGCGTAAGCGTGGGCCGACGACGGGTAAGAAGTATCTTGCTGAGAAGGAAAGAAATCCTGAAGCTAAGCCAGAGATTAATTTCTCAGAAGAATTGAGGCGTGTTGTTGGTCAGGATGCCGATCGTTTCATATGTGAATGCAGCCTTTGGGTGAAAGAGTTTTGCCCGTTAGATTCAGTGAACTGGAGTAGGATGAATGCAACTGCCAAACAGAGGCTATATGATAAAATTAAGGATAATTATACTTTGCCAGAAACCCTTTGTGGTCAACCAATTGATAAAGCTTTGAGCTTTCAATGCGCTGGTCTCTTCAGAGGATGGCGTTTCAGACTTAAGGAAGAATACTTTGATCCTAAATCTAGAGAACAATCTAGGGAAAACATACCCACTGGAGTGGAGCGTGATGCATGGAATTGGTTGGTGGATTTTTGGTCAACTGAAAAGCAACAGCATATCAGTGGCAACAATAGAAAAATTCGACTAATGCAAACCATCAAACCGGCAAATGGTGCAAGGTCTACTGCTCGGATTCTCGATGATATGTTGAATGCGATGATTACTACTGAAAATGAAGATGAACCTGTGTATGTAAGGCTCTATGAAAGGACCAAAAAGCATAAAGATGGAACTTGGGATCCAGATGCGGAAGCAAATTACAATGCACTGAAGAAACTCCACTCCGATGAAATGGAGAAGCATGGGAAAGACAACCTCACTGTGGAAGAAGCTTATATAGATGTGTTGAAGACCCAACCGGGCTACATCAGAGGACTTGGACCTGGATCCCGACCACCAAAAAAGAGCAAAATTGAAGAGTCTACTCAGATAAGAGAACATTTTACTGCTCAAATCCAAGAACTTCAGCAGACTGCGGTGGAGAGGGAAGCTAAGCTTAATGGGGTAATTGCAGACCTCAAGTCATCAAATGATGAGCTACGAAAAAAGATGGAGTGGATGCAACAAGAAGCATTGGAAAGAGAGAATAGATTGAGAGAGGAATTTCTGCAATTGGTGCGCTCTCACAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60914.p1 GENE.R_Transcript_60914~~R_Transcript_60914.p1 ORF type:complete len:426 (+),score=94.59,Transposase_24|PF03004.10|3.8e+03,Transposase_24|PF03004.10|1.1e-15,Transposase_24|PF03004.10|2e+03 R_Transcript_60914:539-1816(+)
MFMDKKMDLNLGKTVARCLGSLLSWRKMRRLSCILKVRHLRACSDMMATPATSGQHHSDVLQEDSQSTLTYRQKRRLNKSKRKGRKRGPTTGKKYLAEKERNPEAKPEINFSEELRRVVGQDADRFICECSLWVKEFCPLDSVNWSRMNATAKQRLYDKIKDNYTLPETLCGQPIDKALSFQCAGLFRGWRFRLKEEYFDPKSREQSRENIPTGVERDAWNWLVDFWSTEKQQHISGNNRKIRLMQTIKPANGARSTARILDDMLNAMITTENEDEPVYVRLYERTKKHKDGTWDPDAEANYNALKKLHSDEMEKHGKDNLTVEEAYIDVLKTQPGYIRGLGPGSRPPKKSKIEESTQIREHFTAQIQELQQTAVEREAKLNGVIADLKSSNDELRKKMEWMQQEALERENRLREEFLQLVRSHR*

Click here to download the sequence:
Link to NCBI Protein BLAST