Transcript Information: R_Transcript_60915.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4961515523062
Replicate 22.5907037346077
Replicate 35.3997466156676
Condition 2: 8 Hour
Replicate 15.2759598505114
Replicate 24.9004510849007
Replicate 37.755384279797
Condition 3: 24 Hour
Replicate 16.0882582703304
Replicate 24.6303858444306
Replicate 37.9005342884565


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60915.p1 GENE.R_Transcript_60915~~R_Transcript_60915.p1 ORF type:complete len:543 (+),score=111.75,Transpos_assoc|PF13963.2|5.5e-20,Transpos_assoc|PF13963.2|7.6e+03,Transposase_24|PF03004.10|3.8e+03,Transposase_24|PF03004.10|1.7e-15,Transposase_24|PF03004.10|3.4e+03 R_Transcript_60915:172-1800(+)
ATGAATAAGGATCGAAGTTGGATGAACCATAGAGGCATAAGGGATAGGAGAAAAGCGGAATATGTAACAGGTGTTGATGAGTTCCTAAATTATGCGTTTAGTGGTAAGGAAGTCGGAGATAAGGTGATGTGTCCGTGTTTGAAGTGTTACTTTAGGAAATGGCTAGTTCGAAGCACAATCCGGTATCATTTGCTATCGTATGGTATAGTTAAGGACTATAATCCGTGGGTGCATCATGGGGAATCTCAACATAATGATAATAGTACTAGTGGGGAAGGACATGAAGGAGGATCTTCTGATTCTGATGACACCACTCCATTAGATTGCGATCCAATTAATCGGTGGAGTTCTATTCTTGAGATTGGACATGTTTATGGACAAGAAGATGGACTTGAATCTAGGAAAGACAGTTGCGAGGTGCCTAGGGAGCTTGTTGAGTTGGCGAAAGATGCGGAGGCTGAGTTGCATCCTAAAACATGCAGTGACATGATGGCAACCCCTGCTACTTCTGGTCAGCACCATTCTGATGTTTTGCAAGAAGATTCCCAGTCGACTTTAACTTATCGGCAGAAGCGGAGGCTTAACAAATCAAAAAGAAAAGGGCGTAAGCGTGGGCCGACGACGGGTAAGAAGTATCTTGCTGAGAAGGAAAGAAATCCTGAAGCTAAGCCAGAGATTAATTTCTCAGAAGAATTGAGGCGTGTTGTTGGTCAGGATGCCGATCGTTTCATATGTGAATGCAGCCTTTGGGTGAAAGAGTTTTGCCCGTTAGATTCAGTGAACTGGAGTAGGATGAATGCAACTGCCAAACAGAGGCTATATGATAAAATTAAGGATAATTATACTTTGCCAGAAACCCTTTGTGGTCAACCAATTGATAAAGCTTTGAGCTTTCAATGCGCTGGTCTCTTCAGAGGATGGCGTTTCAGACTTAAGGAAGAATACTTTGATCCTAAATCTAGAGAACAATCTAGGGAAAACATACCCACTGGAGTGGAGCGTGATGCATGGAATTGGTTGGTGGATTTTTGGTCAACTGAAAAGCAACAGCATATCAGTGGCAACAATAGAAAAATTCGACTAATGCAAACCATCAAACCGGCAAATGGTGCAAGGTCTACTGCTCGGATTCTCGATGATATGTTGAATGCGATGATTACTACTGAAAATGAAGATGAACCTGTGTATGTAAGGCTCTATGAAAGGACCAAAAAGCATAAAGATGGAACTTGGGATCCAGATGCGGAAGCAAATTACAATGCACTGAAGAAACTCCACTCCGATGAAATGGAGAAGCATGGGAAAGACAACCTCACTGTGGAAGAAGCTTATATAGATGTGTTGAAGACCCAACCGGGCTACATCAGAGGACTTGGACCTGGATCCCGACCACCAAAAAAGAGCAAAATTGAAGAGTCTACTCAGATAAGAGAACATTTTACTGCTCAAATCCAAGAACTTCAGCAGACTGCGGTGGAGAGGGAAGCTAAGCTTAATGGGGTAATTGCAGACCTCAAGTCATCAAATGATGAGCTACGAAAAAAGATGGAGTGGATGCAACAAGAAGCATTGGAAAGAGAGAATAGATTGAGAGAGGAATTTCTGCAATTGGTGCGCTCTCACAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60915.p1 GENE.R_Transcript_60915~~R_Transcript_60915.p1 ORF type:complete len:543 (+),score=111.75,Transpos_assoc|PF13963.2|5.5e-20,Transpos_assoc|PF13963.2|7.6e+03,Transposase_24|PF03004.10|3.8e+03,Transposase_24|PF03004.10|1.7e-15,Transposase_24|PF03004.10|3.4e+03 R_Transcript_60915:172-1800(+)
MNKDRSWMNHRGIRDRRKAEYVTGVDEFLNYAFSGKEVGDKVMCPCLKCYFRKWLVRSTIRYHLLSYGIVKDYNPWVHHGESQHNDNSTSGEGHEGGSSDSDDTTPLDCDPINRWSSILEIGHVYGQEDGLESRKDSCEVPRELVELAKDAEAELHPKTCSDMMATPATSGQHHSDVLQEDSQSTLTYRQKRRLNKSKRKGRKRGPTTGKKYLAEKERNPEAKPEINFSEELRRVVGQDADRFICECSLWVKEFCPLDSVNWSRMNATAKQRLYDKIKDNYTLPETLCGQPIDKALSFQCAGLFRGWRFRLKEEYFDPKSREQSRENIPTGVERDAWNWLVDFWSTEKQQHISGNNRKIRLMQTIKPANGARSTARILDDMLNAMITTENEDEPVYVRLYERTKKHKDGTWDPDAEANYNALKKLHSDEMEKHGKDNLTVEEAYIDVLKTQPGYIRGLGPGSRPPKKSKIEESTQIREHFTAQIQELQQTAVEREAKLNGVIADLKSSNDELRKKMEWMQQEALERENRLREEFLQLVRSHR*

Click here to download the sequence:
Link to NCBI Protein BLAST