Transcript Information: R_Transcript_60934.p1


Annotated TAIR IDAT3G52220.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19369580-19370980 | Reverse length=237
E-Value4.6E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9270489402856
Replicate 28.2266206309472
Replicate 310.582644854363
Condition 2: 8 Hour
Replicate 110.739414450546
Replicate 27.3228618895111
Replicate 313.905619831992
Condition 3: 24 Hour
Replicate 111.546031705161
Replicate 27.8676654521942
Replicate 38.1918894734586


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60934.p1 GENE.R_Transcript_60934~~R_Transcript_60934.p1 ORF type:complete len:171 (+),score=40.17,MMtag|PF10159.5|2.5e-34 R_Transcript_60934:71-514(+)
ATGTATCATCCCACCAGAGGCGGTGTTCGCGGTGGTCGTGATCAATTCAAGTGGGATGATGTGAAGGTTGATAAACATCGAGAAAATTACCTGGGTCACAGTGTCAAAGCTCCTGTTGGGCGATGGCAGAAAGGAAAAGATTTATTGTGGTATGCCAGGGACAAAAATTCTCAGGGTTCAGATCAGGATGCTATGAAGGCAGAGATACAAAGGGTCAAAGAAGAAGAGGAACAGTTAATGAGGGAAGCACTCGGCTTAGCTCCAAAGCGTTCTACTCGACCGCAGGGTAGCCGTCTTGATAAGCATGAGTTTTCAGAACTGGTAAAGCGTGGATCAACTGCAGAAGACTTGGGCGGAGGGCATGCTGAAGCAGCTCAGGTTCATGGACTTGGTTTTGCCAGCCATGCAAGGAATTTGGAAGGAGATGGAATAGCAATGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60934.p1 GENE.R_Transcript_60934~~R_Transcript_60934.p1 ORF type:complete len:171 (+),score=40.17,MMtag|PF10159.5|2.5e-34 R_Transcript_60934:71-514(+)
MYHPTRGGVRGGRDQFKWDDVKVDKHRENYLGHSVKAPVGRWQKGKDLLWYARDKNSQGSDQDAMKAEIQRVKEEEEQLMREALGLAPKRSTRPQGSRLDKHEFSELVKRGSTAEDLGGGHAEAAQVHGLGFASHARNLEGDGIAMC*

Click here to download the sequence:
Link to NCBI Protein BLAST