Transcript Information: R_Transcript_60938.p1


Annotated TAIR IDAT3G52220.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19369580-19370980 | Reverse length=237
E-Value1.5E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.279438367026
Replicate 242.40754748114
Replicate 334.76753848586
Condition 2: 8 Hour
Replicate 143.068023326182
Replicate 253.825205696767
Replicate 341.827624473066
Condition 3: 24 Hour
Replicate 138.384001807584
Replicate 237.310872747696
Replicate 335.729731366358


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60938.p1 GENE.R_Transcript_60938~~R_Transcript_60938.p1 ORF type:5prime_partial len:253 (+),score=74.52,MMtag|PF10159.5|5.9e-34,MMtag|PF10159.5|1.6e+04 R_Transcript_60938:2-760(+)
ATCAGCCAAGTCGGAAACTCGGCTGCCAAGTTTGTCGTGGGCGTAACTGGTGGTGCCACAACCATAACCTTGTATCATCCCACCAGAGGCGGTGTTCGCGGTGGTCGTGATCAATTCAAGTGGGATGATGTGAAGGTTGATAAACATCGAGAAAATTACCTGGGTCACAGTGTCAAAGCTCCTGTTGGGCGATGGCAGAAAGGAAAAGATTTATTGTGGTATGCCAGGGACAAAAATTCTCAGGGTTCAGATCAGGATGCTATGAAGGCAGAGATACAAAGGGTCAAAGAAGAAGAGGAACAGTTAATGAGGGAAGCACTCGGCTTAGCTCCAAAGCGTTCTACTCGACCGCAGGGTAGCCGTCTTGATAAGCATGAGTTTTCAGAACTGGTAAAGCGTGGATCAACTGCAGAAGACTTGGGCGGAGGGCATGCTGAAGCAGCTCAGGTTCATGGACTTGGTTTTGCCAGAGCGCCTCGCCCAGAGATGTCAACTTCTGCTCAGCCCAGCGAGAAGGATATTTCTGCCAAGCCAGCTGAAGAGGCTCCCCCAGAGATTGCTGAGAGAATGAACAAAGAGGATTCAGATGAAGAAGGTAGACGAAAGAAAAGGAAGCATGATGAGAGGAAACGTGAGAAGCATGAACATAGGAAGCATGAGAAGCATGAAAAGAGGGAAAAGCGGCATTCTCATGAATCAGATGACAAGCGGAAACGTAGGAAGGATAAGGAGAAAAGAAGAAGACATGACTCGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60938.p1 GENE.R_Transcript_60938~~R_Transcript_60938.p1 ORF type:5prime_partial len:253 (+),score=74.52,MMtag|PF10159.5|5.9e-34,MMtag|PF10159.5|1.6e+04 R_Transcript_60938:2-760(+)
ISQVGNSAAKFVVGVTGGATTITLYHPTRGGVRGGRDQFKWDDVKVDKHRENYLGHSVKAPVGRWQKGKDLLWYARDKNSQGSDQDAMKAEIQRVKEEEEQLMREALGLAPKRSTRPQGSRLDKHEFSELVKRGSTAEDLGGGHAEAAQVHGLGFARAPRPEMSTSAQPSEKDISAKPAEEAPPEIAERMNKEDSDEEGRRKKRKHDERKREKHEHRKHEKHEKREKRHSHESDDKRKRRKDKEKRRRHDSD*

Click here to download the sequence:
Link to NCBI Protein BLAST