Transcript Information: R_Transcript_60960.p1


Annotated TAIR IDAT5G49100.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06868.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19897700-19898890 | Reverse length=396
E-Value4.7E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1065100605599
Replicate 29.6022467987009
Replicate 39.6739613918106
Condition 2: 8 Hour
Replicate 18.4655725638178
Replicate 26.8012310195291
Replicate 38.5793170547124
Condition 3: 24 Hour
Replicate 111.303077956747
Replicate 210.08654071801
Replicate 311.542531355672


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60960.p1 GENE.R_Transcript_60960~~R_Transcript_60960.p1 ORF type:complete len:457 (+),score=67.96 R_Transcript_60960:213-1583(+)
ATGGTGTTGGATAGCAAAGCCGCCGTGGGAGGTGGCTGTGGCGGCGGAGGAGCTGTGGTCGTGGTGGATGACGACATGGGGGATGGTATGCAATGCACTGACCACCCGTTCAGAAGCAACTCTCCTGGTGGGATCTGCGCTTTTTGCTTACAAGACAAACTAGGCAAGCTCGTTTCCTCTTCTTCTTCCTCTTTCTACATCGGCTCTTCTTCCTCCTCTTCTCCTTCTTTCAGATCTGACCTCCCAACTATCCGCCTCAACTCTTCCTCTTCTCTCTCCCTCCACCCCTCCACCACCGCAGTCGCCACCGCCTCTTCCACCACCACCACCTCTTTGAATAATACTAGCAATGTTGACGAAAATAGCAACCGTGGGCATGGTAGTCGTTATCAAGAAGGTTATTATACATCAACAAGGAGGGCCCGGATACCTTTTTTACTAACTCAAAAGAAGAAGAAAAAGACCCTCATGAGTGGAAGTGCTTCTACTACTACTACTACTACGAGTTCAACTTCTTCTGAGATGGTCCTCAAAAGAAGTAAGTCTACTGCTACCCCTCGATCTGGCGGTTATTTCCCTTCTGATGCCGACGACTTCAGCCCTAGGCGAAGGGGCTTTTGGTCTTTTCTCCACCTCACCAATCACAAGAAGCCCTCTGACCGTTCAATAAAAATCGGCCCAGGCCCAGTCCCTAAACCAAACCCAAACCGAGACCAAAGTCAACGCCCATCCACGGTTGAGACGAAGAAGGTGGAGTACGTGATAGTGGATGAGGGGACGGACAGCAGTCCCAACAGCAGTGCAGGGGGGAGCAGCAGCAATAACACCAACAGCAACAATACGGCGTCGTTTGGGAGGAAGGTGTCCAGATCTAGATCCGTAGGGTGTGGGAGTAGGAGTTTCTCAGGGGATTTCTTTGAGCGAATCTCAACAGGGTTTGGGGACTGCACCTTGAGGCGCGTGGAGTCACAGCGCGAAGGTAAACGCGCTTCTTCTGCCTCACGCGCTTCCGTCGCTGATCCTTTGAAGGAGCGCGTGCGTTGTGGTGGTCTCTTTGGTGGCTTCATGATGATCACTTCCTCATCCTCGTCGTCTTCTTCTTCCTCCTACTGGACCTCCGTGGCGGACGATAATGGGCGGCCCAATGGGCCGGCTGCTACTCCCGGGGCTGGCCATCTTGTCCATGGTCGAAGCAGGAGCTGGGGTTGGGCCTTCGCCAGCCCAATGCGGGCCTTCCAAAAGCCCACCACCACCATCATTAAAGATGGCAAGAGAGATTTGGGTTGTGAGAAGAAGGGAGAGAGTAACGGTAAAAGTACAAGCACGCCCAATTTGGCTGCCATTCCTTCATTGCTAGCTGTAAGAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60960.p1 GENE.R_Transcript_60960~~R_Transcript_60960.p1 ORF type:complete len:457 (+),score=67.96 R_Transcript_60960:213-1583(+)
MVLDSKAAVGGGCGGGGAVVVVDDDMGDGMQCTDHPFRSNSPGGICAFCLQDKLGKLVSSSSSSFYIGSSSSSSPSFRSDLPTIRLNSSSSLSLHPSTTAVATASSTTTTSLNNTSNVDENSNRGHGSRYQEGYYTSTRRARIPFLLTQKKKKKTLMSGSASTTTTTTSSTSSEMVLKRSKSTATPRSGGYFPSDADDFSPRRRGFWSFLHLTNHKKPSDRSIKIGPGPVPKPNPNRDQSQRPSTVETKKVEYVIVDEGTDSSPNSSAGGSSSNNTNSNNTASFGRKVSRSRSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKRASSASRASVADPLKERVRCGGLFGGFMMITSSSSSSSSSSYWTSVADDNGRPNGPAATPGAGHLVHGRSRSWGWAFASPMRAFQKPTTTIIKDGKRDLGCEKKGESNGKSTSTPNLAAIPSLLAVRG*

Click here to download the sequence:
Link to NCBI Protein BLAST