Transcript Information: R_Transcript_60976.p1


Annotated TAIR IDAT3G43930.1
Annotated Gene NameBRCT domain-containing DNA repair protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:15760948-15763263 | Reverse length=502
E-Value3E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3865556488315
Replicate 21.7827047523272
Replicate 33.0974519391024
Condition 2: 8 Hour
Replicate 11.3089927801986
Replicate 21.4063447698859
Replicate 31.8265771693471
Condition 3: 24 Hour
Replicate 12.7433857693483
Replicate 22.0113286409646
Replicate 32.3401948407375


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_60976.p1 GENE.R_Transcript_60976~~R_Transcript_60976.p1 ORF type:3prime_partial len:318 (+),score=59.23,PTCB-BRCT|PF12738.3|4e-11,PTCB-BRCT|PF12738.3|2.4e+03,BRCT|PF00533.22|1.9e-09,BRCT|PF00533.22|5e+03 R_Transcript_60976:384-1334(+)
ATGGCTGAGGGAGAGGGGAAGGTGGCGGGGATATCATCTTCTTCCGAAATTGAGCTTGGATTTCGACCTTTTTCTGGCCTTGTAATATGCGTAACTGGACTTTCAAAAGAATCCAGGAAGCAAGTCATGGAAGTGACGGAGAGATTAGGTGGGAGATATAGCCCCAGTTTGCATCCTGAGTGCACACACTTGGTGGTCCAAAGTTTTGGAGGATGGAAACTAGAACATACATTGAAGTATGGATTAAGCAATGGGCTTTTTGTTGTTACTCTTGGTTGGTTTGTTGACAGTGTGAGGAAAAATGTGAGGTTATGTGAATCACCATACTTCATTCATAGTGCTGCAAAAGTCGGCACAAGAATGGAAGATTGGTTTGTCAATCTTGAAGGCGCTCAGAATTCTTGCATTCCAATCGACTCAAAGCAAATATTGAAGCCATCTAAAGAAATCAGAGGACATCAACAGCAGAATTCGGAAGACACATTTGAAACAAACCAAGAGTATCATTTAGTAGGTCATTTGGTGTACATTGATTCAGATATTTCTGTGAACCTTCGCTGTAAGGTGGTTGACGCAGTTACCCGAGAAGGTGCTGTGCTTGTTGATCAATGGTTTGTTGGTTGCGGTGCAAACTATGTGGTTTGTGAGGGATCATCTGTTAAAAAATATCTTGGCCTTTGTGATAACATTGTTAGTCCTTTATGGTTTCTGAAGACATCTAAAGAGCGATCAATGCGACGATTTGTTGGAATTTCTGCTGATCTTGCTAGACAAGTGGGTTTGATGCTTGAAAATCTAAAAGATGTAATCACAGAACAGGAAACTTCCGAGGAAAGGTTTTATGGGCAAAGACTATTTTCTGAAAGCAATAAAGTAAGCCAAGTAGAGAGATTGGAGATTGTGAATCTTGCAAAATGTGGCATTAGAAGTCGTCGTGCTCGACATCTACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_60976.p1 GENE.R_Transcript_60976~~R_Transcript_60976.p1 ORF type:3prime_partial len:318 (+),score=59.23,PTCB-BRCT|PF12738.3|4e-11,PTCB-BRCT|PF12738.3|2.4e+03,BRCT|PF00533.22|1.9e-09,BRCT|PF00533.22|5e+03 R_Transcript_60976:384-1334(+)
MAEGEGKVAGISSSSEIELGFRPFSGLVICVTGLSKESRKQVMEVTERLGGRYSPSLHPECTHLVVQSFGGWKLEHTLKYGLSNGLFVVTLGWFVDSVRKNVRLCESPYFIHSAAKVGTRMEDWFVNLEGAQNSCIPIDSKQILKPSKEIRGHQQQNSEDTFETNQEYHLVGHLVYIDSDISVNLRCKVVDAVTREGAVLVDQWFVGCGANYVVCEGSSVKKYLGLCDNIVSPLWFLKTSKERSMRRFVGISADLARQVGLMLENLKDVITEQETSEERFYGQRLFSESNKVSQVERLEIVNLAKCGIRSRRARHLQ

Click here to download the sequence:
Link to NCBI Protein BLAST