Transcript Information: R_Transcript_6099.p1


Annotated TAIR IDAT2G26490.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11268035-11269432 | Forward length=465
E-Value3.7E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5118753607411
Replicate 21.3965429175978
Replicate 32.048997170298
Condition 2: 8 Hour
Replicate 10.44928192563753
Replicate 20.46157783617126
Replicate 30.54121774785557
Condition 3: 24 Hour
Replicate 10.15796656349338
Replicate 21.5681491413025
Replicate 30.20080463015502


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6099.p1 GENE.R_Transcript_6099~~R_Transcript_6099.p1 ORF type:3prime_partial len:436 (+),score=39.73,WD40|PF00400.28|0.091,WD40|PF00400.28|0.78,WD40|PF00400.28|0.022,WD40|PF00400.28|8.2e-06,WD40|PF00400.28|0.076,WD40|PF00400.28|0.011,WD40|PF00400.28|4.2e-05,Nup160|PF11715.4|5.4e-06,Nup160|PF11715.4|18,PQQ_3|PF13570.2|12,PQQ_3|PF13570.2|1.5,PQQ_3|PF13570.2|1.2e+04,PQQ_3|PF13570.2|0.14,PQQ_3|PF13570.2|72,PQQ_3|PF13570.2|2.3e+03,Nucleoporin_N|PF08801.7|3e+02,Nucleoporin_N|PF08801.7|0.27,Nucleoporin_N|PF08801.7|0.087,Nucleoporin_N|PF08801.7|6.5,Nucleoporin_N|PF08801.7|3.3e+02 R_Transcript_6099:137-1441(+)
ATGTTTGAATCACAGAGTGTAGATAGATCAAAATATGCAAGCATCTCACATTCAGATCCTAGCTTACCAACAATGGCAGATGACACGGATTATTCGATCCGACAAAGCAGCTTCTCGGCAATGGGGAACTCTTTCATTGATGATCAGCCAAGAGCTAGCGCTGAAATGTCTCCTATGATGATGTCACCTTGGAATCAAGTCTCCCCTTTTGCAAAATCGCCTTGGTCGCAACAATCTGACGCCCTTGAAGAACCTTCTCAACAGAATGCCATGATTGGTTCACTTGTTCGTGAAGAGGGTCACATTTATTCCTTAGCTACAAAGGGTGACCTTCTTTACACCGGGTCGGATAGTAAAAACATTCGTGTTTGGAAGAACTTGAAGGAGTTTTCCGGGTTTAAATCAGCTTCGGGGCTAGTCAAGGCGATTGTGATAGCTGGGGGAAAGATATTTACGGGTCATCAAGACGGTAAGATTCGGGTCTGGAAAGTCTCTCCTAAGAACCCAAGCGTTCACAAACGGGCCGGATCGTTACCCACTTTGAAAGATATTTTCAAGGCATCCATAAAGCCCAGCAACTATGTCGAGGTGAAACGACACCGTAGCGCTTTATGGATAAAACACTCGGACGCGATATCTTGTTTGAGCATGTGTGAAGAACAAGGGCTGTTGTACTCAGCGTCATGGGATAGGACCTTCAAGGTGTGGCGGATCTCCGATTCCAAATGCCTGGAGTCAGTGGCCGCCCACGAGGATGCCGTCAACTCCGTGGTGGCGAGCTCGGAGGGGCTCGTCTTCACGGGGTCTGCTGATGGGACCGTCAAGGTGTGGAGGAGAGAGATGCAAGGGAAAGGGAGCAAACACTTCTTTGTGCAAACCTTGCTCAAGCAAGAGTGCGCAGTGACCGCCCTAGCCGTGGACCCCACCGGCTCGATCGTGTACTGCGGGTCCAGTGATGGTATGGTGAACTTCTGGGAGAGGGAGAAGAACTTGGCCCACGGAGGGGTGCTCAGAGGCCATAAGTTGGCCGTCCTTTGCCTCGCCGCACGTGCTCGGCTCGTGTTTAGCGGATCAGCTGATAAGAGTATCTGCGTTTGGCGGAGGGACGGGACAGTGCATACGTGCCTCTCGGTGTTGTCCGGACACGGTGGACCCGTCAAGTGTTTGGCTGTTGAGGATGATAAGGATAATAAGAAAGAAGGGCAACAACGGTACGTGTTGTACAGTGGAAGTCTTGATAAGTCTGTTAAGGTGTGGAGTGTTAATGATCAAGAGAATAACAATATGGGTATGATGATGCAACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6099.p1 GENE.R_Transcript_6099~~R_Transcript_6099.p1 ORF type:3prime_partial len:436 (+),score=39.73,WD40|PF00400.28|0.091,WD40|PF00400.28|0.78,WD40|PF00400.28|0.022,WD40|PF00400.28|8.2e-06,WD40|PF00400.28|0.076,WD40|PF00400.28|0.011,WD40|PF00400.28|4.2e-05,Nup160|PF11715.4|5.4e-06,Nup160|PF11715.4|18,PQQ_3|PF13570.2|12,PQQ_3|PF13570.2|1.5,PQQ_3|PF13570.2|1.2e+04,PQQ_3|PF13570.2|0.14,PQQ_3|PF13570.2|72,PQQ_3|PF13570.2|2.3e+03,Nucleoporin_N|PF08801.7|3e+02,Nucleoporin_N|PF08801.7|0.27,Nucleoporin_N|PF08801.7|0.087,Nucleoporin_N|PF08801.7|6.5,Nucleoporin_N|PF08801.7|3.3e+02 R_Transcript_6099:137-1441(+)
MFESQSVDRSKYASISHSDPSLPTMADDTDYSIRQSSFSAMGNSFIDDQPRASAEMSPMMMSPWNQVSPFAKSPWSQQSDALEEPSQQNAMIGSLVREEGHIYSLATKGDLLYTGSDSKNIRVWKNLKEFSGFKSASGLVKAIVIAGGKIFTGHQDGKIRVWKVSPKNPSVHKRAGSLPTLKDIFKASIKPSNYVEVKRHRSALWIKHSDAISCLSMCEEQGLLYSASWDRTFKVWRISDSKCLESVAAHEDAVNSVVASSEGLVFTGSADGTVKVWRREMQGKGSKHFFVQTLLKQECAVTALAVDPTGSIVYCGSSDGMVNFWEREKNLAHGGVLRGHKLAVLCLAARARLVFSGSADKSICVWRRDGTVHTCLSVLSGHGGPVKCLAVEDDKDNKKEGQQRYVLYSGSLDKSVKVWSVNDQENNNMGMMMQQ

Click here to download the sequence:
Link to NCBI Protein BLAST