Transcript Information: R_Transcript_6100.p1


Annotated TAIR IDAT2G26490.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11268035-11269432 | Forward length=465
E-Value9.6E-215
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6699310678414
Replicate 28.2288530924481
Replicate 38.1908940495333
Condition 2: 8 Hour
Replicate 11.632390996483
Replicate 21.6714194507553
Replicate 33.1536131582894
Condition 3: 24 Hour
Replicate 13.1537997807755
Replicate 23.4753741282122
Replicate 32.6088375283373


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6100.p1 GENE.R_Transcript_6100~~R_Transcript_6100.p1 ORF type:complete len:495 (+),score=44.16,WD40|PF00400.28|0.11,WD40|PF00400.28|0.92,WD40|PF00400.28|0.026,WD40|PF00400.28|9.7e-06,WD40|PF00400.28|0.09,WD40|PF00400.28|0.013,WD40|PF00400.28|3.5e-05,Nup160|PF11715.4|7.6e-06,Nup160|PF11715.4|1.6,Nucleoporin_N|PF08801.7|2.9e+02,Nucleoporin_N|PF08801.7|0.3,Nucleoporin_N|PF08801.7|0.35,Nucleoporin_N|PF08801.7|8.1,Nucleoporin_N|PF08801.7|2.2,PQQ_3|PF13570.2|13,PQQ_3|PF13570.2|1.8,PQQ_3|PF13570.2|1.6e+04,PQQ_3|PF13570.2|0.2,PQQ_3|PF13570.2|85,PQQ_3|PF13570.2|3.1e+03 R_Transcript_6100:194-1486(+)
ATGGCAGATGACACAGATTATTCGATCCGAAAAAGCAGCTTCTCGGCAATGGGGAACTCTTTCATTGATGATCAGCCAAGAGCTAGCGCTGAAATGTCTCCTATGATGATGTCACCTTGGAATCAAGTCTCCCCTTTTGCAAAATCGCCTTGGTCGCAACAATCTGACGCCCTTGAAGAACCTTCTCAACAGAATGCCATGATTGGTTCACTTGTTCGTGAAGAGGGTCACATTTATTCCTTAGCTACAAAGGGTGACCTTCTTTACACCGGGTCGGATAGTAAAAACATTCGTGTTTGGAAGAACTTGAAGGAGTTTTCCGGGTTTAAATCAGCTTCGGGGCTAGTCAAGGCGATTGTGATAGCTGGGGGAAAGATATTTACGGGTCATCAAGACGGTAAGATTCGGGTCTGGAAAGTCTCTCCTAAGAACCCAAGCGTTCACAAACGGGCCGGATCGTTACCCACTTTGAAAGATATTTTCAAGGCATCCATAAAGCCCAGCAACTATGTCGAGGTGAAACGACACCGTAGCGCTTTATGGATAAAACACTCGGACGCGATATCTTGTTTGAGCATGTGTGAAGAACAAGGGCTGTTGTACTCAGCGTCATGGGATAGGACCTTCAAGGTGTGGCGGATCTCCGATTCCAAATGCCTGGAGTCAGTGGCCGCCCACGAGGATGCCGTCAACTCCGTGGTGGCGAGCTCGGAGGGGCTCGTCTTCACGGGGTCTGCTGATGGGACCGTCAAGGTGTGGAGGAGAGAGATGCAAGGGAAAGGGAGCAAACACTTCTTTGTGCAAACCTTGCTCAAGCAAGAGTGCGCAGTGACCGCCCTAGCCGTGGACCCCACCGGCTCGATCGTGTACTGCGGGTCCAGTGATGGTATGGTGAACTTCTGGGAGAGGGAGAAGAACTTGGCCCACGGAGGGGTGCTCAGAGGCCATAAGTTGGCCGTCCTTTGCCTCGCCGCACGTGCTCGGCTCGTGTTTAGCGGATCAGCTGATAAGAGTATCTGCGTTTGGCGGAGGGACGGGACAGTGCACACGTGCCTCTCGGTGCTGTCCGGACACAGTGGACCGGTCAAGTGTTTGGCTGTTGAGGATGATAAGGATAATAAGAAAGAAGGGCAACAACGGTACGTGTTGTACAGTGGAAGTCTTGATAAGTCGGTTAAGGTGTGGAGTATTACTGATCAAGAGAATAACAGTATGGGTATGATGATGCAACAACAAGTGATGGAGGTTGATTCTGCCTCTGAGTCACTGCGATCTGACCGTAGCTCTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6100.p1 GENE.R_Transcript_6100~~R_Transcript_6100.p1 ORF type:complete len:495 (+),score=44.16,WD40|PF00400.28|0.11,WD40|PF00400.28|0.92,WD40|PF00400.28|0.026,WD40|PF00400.28|9.7e-06,WD40|PF00400.28|0.09,WD40|PF00400.28|0.013,WD40|PF00400.28|3.5e-05,Nup160|PF11715.4|7.6e-06,Nup160|PF11715.4|1.6,Nucleoporin_N|PF08801.7|2.9e+02,Nucleoporin_N|PF08801.7|0.3,Nucleoporin_N|PF08801.7|0.35,Nucleoporin_N|PF08801.7|8.1,Nucleoporin_N|PF08801.7|2.2,PQQ_3|PF13570.2|13,PQQ_3|PF13570.2|1.8,PQQ_3|PF13570.2|1.6e+04,PQQ_3|PF13570.2|0.2,PQQ_3|PF13570.2|85,PQQ_3|PF13570.2|3.1e+03 R_Transcript_6100:194-1486(+)
MADDTDYSIRKSSFSAMGNSFIDDQPRASAEMSPMMMSPWNQVSPFAKSPWSQQSDALEEPSQQNAMIGSLVREEGHIYSLATKGDLLYTGSDSKNIRVWKNLKEFSGFKSASGLVKAIVIAGGKIFTGHQDGKIRVWKVSPKNPSVHKRAGSLPTLKDIFKASIKPSNYVEVKRHRSALWIKHSDAISCLSMCEEQGLLYSASWDRTFKVWRISDSKCLESVAAHEDAVNSVVASSEGLVFTGSADGTVKVWRREMQGKGSKHFFVQTLLKQECAVTALAVDPTGSIVYCGSSDGMVNFWEREKNLAHGGVLRGHKLAVLCLAARARLVFSGSADKSICVWRRDGTVHTCLSVLSGHSGPVKCLAVEDDKDNKKEGQQRYVLYSGSLDKSVKVWSITDQENNSMGMMMQQQVMEVDSASESLRSDRSSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST