Transcript Information: R_Transcript_61066.p1


Annotated TAIR IDAT1G59750.1
Annotated Gene Nameauxin response factor 1
Annotated Gene Symbol(s)ARF1
Annotation TypeOrtholog
Chromosome Positionchr1:21980414-21984193 | Forward length=665
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.955549046077
Replicate 230.7039272654
Replicate 335.084566468806
Condition 2: 8 Hour
Replicate 133.041167157729
Replicate 236.100700803842
Replicate 345.132995684125
Condition 3: 24 Hour
Replicate 134.955336004833
Replicate 228.200172888705
Replicate 330.227447587176


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61066.p1 GENE.R_Transcript_61066~~R_Transcript_61066.p1 ORF type:complete len:664 (+),score=166.98,Auxin_resp|PF06507.9|3.1e-34,B3|PF02362.17|9.3e-21,B3|PF02362.17|3.4e+03,B3|PF02362.17|62,AUX_IAA|PF02309.12|2.9e-13 R_Transcript_61066:595-2586(+)
ATGGCACTCGCAAGCACTCAGTGTCCTAGTGGACGCCCTCGGCAAGATGCTCTGTACAAGGAGCTGTGGTATGCATGCGCTGGACCCCTTGTAAATGTTCCCCGTGAAGGCGAGCGTGTTTATTACTTTCCTCAAGGCCACATGGAGCAGCTTGAAGCGTCAACTCATCAGGGATTAGAACAGCAGATGCCTTCATTCAACTTGCCATCTAAAATCCTTTGCAATGTGGTGAATGTTGAACTTCGGGCGGAACCTGAAACGGACGAGGTTTATGCACAGATAACTCTAGTTCCTGAAAGAGATCAAAGTGATGTTACAAAGCCTGATCCTCCTGCCCCTGAGCCTCCAAGATGCAATGTCCATTCATTTTGCAAGACTTTAACAGCTTCTGACACTAGCACACATGGTGGATTTTCTGTGCTTCGGAGACATGCTGATGATTGCTTACCACCCTTGGATATGTCTCAGCAGCCTCCTTGGCAGGAGCTTGTTGCAACAGATCTCCATGGAAACGAATGGCGTTTCCGTCACATTTTTCGAGGTCAACCAAGGCGTCACCTACTGACAACAGGATGGAGTGTTTTTGTCAGTTCAAAGAAGCTAGTGGCTGGTGATGCATTTATATTTTTGAGAGGTGAAAAAGGCGAGCTGCGTGTTGGAGTGAGGAGGCTAATGAGACAATTAAACAATATGCCATCTTCTGTTATTTCTAGTCACAGTATGCACCTTGGTGTTCTTGCCACAGCGGCGCATGCAATTCAAACGGGGACACTTTTTTCAGTTTTCTACAAGCCAAGGACTAGTAGGTCTGAGTTCCTTGTGAGTGTTAACAAGTACCTTGAGGCCAAAAGCCATAAGCTCTCTGTTGGTATGAGGTTTAAAATGAGATTCGAAGGTGACGAAGTTCCTGAAAGAAGGTTCAGTGGCACAATTGTTGGCGTCAGTGATACTTCATCATCCAGTTGGGTGGACTCTGAATGGAGATCTTTGAAGGTTCAATGGGATGAACCTTCATCAGTTATACGTCCAGAGAAGGTTTCACCATGGGAATTGGAGCCGCTTGTGGCAACTAATACTGCCAATTCCCAGCCTGTCCAGAGGAATAAGCGGCCACGACCAGCTGTGATACCTTCCTCAGTGCCAGAGATGTCTCCTCTGGGCATTTGGAAGTGTCCAGGTGAACCTGCTGCCACATGTGCTGAAGTTAAGCGTGCCCATGATCAGTTTTCTTCTGTGACAAAAGCTGGTTCGCTCGGTTTCACTGCAAACAATTCTGTTGCAGCGGTTTCCAGCCAGTCAGTCTATTGGTCAAACAGAATGGAAAATATATCCGAGTCCTTGGGTTCCGTTGTTGATAAAGAATCTGTTGAAAAGAGAAAGACTAGTGGAGTTGGGTGTCGGCTGTTTGGAATTCAACTTGTTGACAACTCCAATTTGGATGAGACTGCTGCTGGTGCTACAATATCAGCACAAGGTGGTGAGGAGCTGCCTCTTCCATCGCTAGAGGCTGAATCTGATCGGTCGAATATCAACCGATCTGATGTGCCTTCATTGAGTTGTGATCTCGACAAATCTTCACAGAGATCTCCAACAGAGTCACAGAGCAAGCAAATTCGCTCCTGCACAAAGGTTCATATGCAAGGTGTTGCTGTTGGGAGGGCTGTAGATTTGACACGTTTTGACTGTTATGAGGATCTCCTCAAGAAACTGGAAGACATGTTTGATATTAAAGGTGAGCTCTGCAGCTCTTCAGGGAAATGGCAGGTTGTCTACACAGATGATGAGGATGACATGATGATGGTTGGAGATGACCCATGGAATGAGTTCTGCAGCATGGTCAGGAAGATCTTCATCTACACATCTGAAGAAGTCAAGCGTCTGTCACCAAAGAATAAAATCTCTGTTGGTGGAGATGCGAAACCAGGCAATGTTGATACTGATATGCCAGCTGCATCTGAGGAGCAGTCATCTGCTGTCGGTCATAGCTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61066.p1 GENE.R_Transcript_61066~~R_Transcript_61066.p1 ORF type:complete len:664 (+),score=166.98,Auxin_resp|PF06507.9|3.1e-34,B3|PF02362.17|9.3e-21,B3|PF02362.17|3.4e+03,B3|PF02362.17|62,AUX_IAA|PF02309.12|2.9e-13 R_Transcript_61066:595-2586(+)
MALASTQCPSGRPRQDALYKELWYACAGPLVNVPREGERVYYFPQGHMEQLEASTHQGLEQQMPSFNLPSKILCNVVNVELRAEPETDEVYAQITLVPERDQSDVTKPDPPAPEPPRCNVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWRFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGEKGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATAAHAIQTGTLFSVFYKPRTSRSEFLVSVNKYLEAKSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVSDTSSSSWVDSEWRSLKVQWDEPSSVIRPEKVSPWELEPLVATNTANSQPVQRNKRPRPAVIPSSVPEMSPLGIWKCPGEPAATCAEVKRAHDQFSSVTKAGSLGFTANNSVAAVSSQSVYWSNRMENISESLGSVVDKESVEKRKTSGVGCRLFGIQLVDNSNLDETAAGATISAQGGEELPLPSLEAESDRSNINRSDVPSLSCDLDKSSQRSPTESQSKQIRSCTKVHMQGVAVGRAVDLTRFDCYEDLLKKLEDMFDIKGELCSSSGKWQVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVKRLSPKNKISVGGDAKPGNVDTDMPAASEEQSSAVGHSL*

Click here to download the sequence:
Link to NCBI Protein BLAST