Transcript Information: R_Transcript_61073.p1


Annotated TAIR IDAT1G05500.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1, SYT5
Annotation TypeOrtholog
Chromosome Positionchr1:1625098-1628940 | Forward length=560
E-Value1.7e-316
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.862618099063
Replicate 223.815591638275
Replicate 326.265852826684
Condition 2: 8 Hour
Replicate 129.720475651515
Replicate 234.805542229831
Replicate 343.711387412699
Condition 3: 24 Hour
Replicate 132.652004979332
Replicate 231.3293783534
Replicate 335.19047926692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61073.p1 GENE.R_Transcript_61073~~R_Transcript_61073.p1 ORF type:complete len:566 (+),score=97.64,C2|PF00168.26|2.9e-22,C2|PF00168.26|3.6e-25,SMP_LBD|PF17047.1|1e-15 R_Transcript_61073:340-2037(+)
ATGTCCTTCTTTCTGGGTTTGGTGATTGGGATAGTAGCAGGGTTTTCACTGATAGTTCTCTTTGTTCGCTGTGAAAATGCTCGATCCAAACGCCGCTCTCAACTTGCAGCTACAATTGCAGCATTTGCAAGGATGACAGTGGAAGATTCTAGAAAGTTGTTACCCCCACCTTACTACCCTTCTTGGGTTGTCTTCTCTCAACGCCAAAAGTTGAATTGGCTCAATACCCATCTAGTCAAAATTTGGCCTTATGTTGACCAGGCTGCTTCTGAGCTAATAAGGGCTTCAGTGGAACCAGTATTAGAGCAATATAGACCGATTATTTTGTCAGCCTTGAAATTTTCCAAGTTCACTCTTGGTACTGTTGCTCCTCAATTTACAGGGGTTGCAATCATTGATGACAATGAAGATGGTATTACCATGGAACTGGAAATGAATTGGGACGGAAATCCCAGCATTATCCTTGATATCAAGACTAGGCTTGGTGTCTCCCTACCTGTACAGGTAAAGGATATTGGGTTCACTGGTATTTTCAGGTTGATATTTAAGCCTCTAGTTCCAGAGTTTCCAGGCTTTGGAGCTGTAAGCTACTCATTGAGAAAAAAGAAAAAGTTAAATTTTACTCTTAAAGTCGTTGGTGGAGACATATCTGCAATCCCAGGGCTTTCTGATGCGATCGAGAGTACTATCAGGGACGCCATTGAGGATTCTATCATGTGGCCAGTTCGTAAAATTATTCCCATTTTGCCGGGTGACTATAGTGACTTAGAGCTAAAGCCTGAGGGAATACTAGAGGTGAAGCTTGTGCAAGCTAAAGAGTTGACAGATAAGGATCTGATTGGGAAATCAGATCCCTTTGCGGTGTTATATGTACGCCCTACACGTGATAGGATGAAGACCAGTAAGACAATTAATAACCAGCTGAACCCTATCTGGAACGAGCACTTTGAATTTATAGTTGAGGATAAATCTACCCAAAACTTGGTTGTAAAAATCTATGATGACGAGGGCCTTCAAGCAGCTGAATTCATAGGTTGTGCACAATTCCATCTGAAGGACCTTGAGCCCGGTAAAGTGAAGGATGTATGGCTCAAACTTGTCAAAGATTTGGAGGTTCAGAGAGATACGAAGAACAGGGGGCAGGTACATTTGGAGCTATTATATTGCCCTTTCGGTGCAAGTGGTGTTAAAAATCCTTTTGCGTCTTCAGTTTCCATGACTTCACTGGAGAAGGTTCTTAAAACTGGAGTAGATGATACTGAAACTTTTGAAAATGGAACCAACCTTGTTCCTAAGAGGAAGGAGGTTATTGTCAGAGGGGTGCTGTCTGTTACAGTTATTTCTGGTGATGACCTACCTGCAGCAGATCTATTCGGAAAGTCAGACCCATATGTTACACTCACTATGAAGAAATCTGGAACAAGAAACAAAACTAGGGTTGTGAATGAAAGCTTAAATCCAGTTTGGAACCAGACATTTGACTTCCTTGTCGAGGATGGGCTACATGATATGCTAATCTTGGAAGTATGGGATCATGACACCTTCGGGAAGGATTATATGGGTAGATGCATCATGACATTGACAAGAGTTATATTAGAGGGAGAATATGAAGACAGTTTTCCACTAGATGGAGCTAAGACCGGTGCCCTGAATTTGTCTCTGAAGTGGAGTCCTCAACCTGTGTATCGTGACTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61073.p1 GENE.R_Transcript_61073~~R_Transcript_61073.p1 ORF type:complete len:566 (+),score=97.64,C2|PF00168.26|2.9e-22,C2|PF00168.26|3.6e-25,SMP_LBD|PF17047.1|1e-15 R_Transcript_61073:340-2037(+)
MSFFLGLVIGIVAGFSLIVLFVRCENARSKRRSQLAATIAAFARMTVEDSRKLLPPPYYPSWVVFSQRQKLNWLNTHLVKIWPYVDQAASELIRASVEPVLEQYRPIILSALKFSKFTLGTVAPQFTGVAIIDDNEDGITMELEMNWDGNPSIILDIKTRLGVSLPVQVKDIGFTGIFRLIFKPLVPEFPGFGAVSYSLRKKKKLNFTLKVVGGDISAIPGLSDAIESTIRDAIEDSIMWPVRKIIPILPGDYSDLELKPEGILEVKLVQAKELTDKDLIGKSDPFAVLYVRPTRDRMKTSKTINNQLNPIWNEHFEFIVEDKSTQNLVVKIYDDEGLQAAEFIGCAQFHLKDLEPGKVKDVWLKLVKDLEVQRDTKNRGQVHLELLYCPFGASGVKNPFASSVSMTSLEKVLKTGVDDTETFENGTNLVPKRKEVIVRGVLSVTVISGDDLPAADLFGKSDPYVTLTMKKSGTRNKTRVVNESLNPVWNQTFDFLVEDGLHDMLILEVWDHDTFGKDYMGRCIMTLTRVILEGEYEDSFPLDGAKTGALNLSLKWSPQPVYRDS*

Click here to download the sequence:
Link to NCBI Protein BLAST