Transcript Information: R_Transcript_61087.p2


Annotated TAIR IDAT5G09280.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2880423-2881597 | Reverse length=297
E-Value1.5E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2554946688431
Replicate 20.66654921956502
Replicate 30.90899752365684
Condition 2: 8 Hour
Replicate 12.3967645583282
Replicate 21.7746731619989
Replicate 31.7767449549056
Condition 3: 24 Hour
Replicate 10.85028915658163
Replicate 20.46677796593814
Replicate 30.69484776783801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61087.p2 GENE.R_Transcript_61087~~R_Transcript_61087.p2 ORF type:complete len:378 (+),score=63.00,Pec_lyase_C|PF00544.15|2.7e-28 R_Transcript_61087:2209-3342(+)
ATGACTACTCAGATTCTCTCAGCACTCTTTCTTTCCATTCTGCTAGCCATAGCGCCAAACAGCAGTTTGGCTAAGAAAACTGGCCTTGCAAAATGGAATGCCATTGATGTCTGCTGGCGTGGGAACACTAACTGGGCATCGCAAAGGCAAGAGCTAGCGCGATGCTCAGCAGGTTACGTAGGGAAGATGACTAACAATGTCGGAAAGGATGTAACGAAATATGTCGTCACAGATCCTAGTGATGATGCCGTGAATCCTAAGCCTGGGACTCTTCGTTATGGAGTCACCAAGATTCCTGGAAAGGTATGGATCACATTCCAAAAGGACATGAACATCAAGCTCGCGAGGCCCCTTGTTGTTGGAAGCTTTACAACCATTGATGGCCGAGGTGCTAGTGTTCACATCTCTAAGGGTGGTTGCCTCTTGCTCCATAAGGTTACTGATGTTATCATCCATGGCTTGCGAATCCACCATTGTCGTGCTCAACCAGCAGGCAAAGTGATGGGACCTGGTTCCAAGCTGATTGAACTCAGCGAGATGGATGGTGATGCCATTAGGATGATTGCATCCAAAAAGGTTTGGATAGACCACAACACCTTATATAAATCCGAGGATGGCCTCATAGATGTAACCCTTGGTTCAACCAACATCACCATCTCAAATAACTGGTTCAGGGACCATGACAAGGTCATGCTCCTCGGCCATGATGATGCATTCAAAGCTGATAGGGACATGAAGGTCACAGTTGTATACAACCGTTTTGGCCCTAACTGCAACCAGCGTATGCCAAGGGTCCGTCATGGGTATGCTCATGTTGTTAACAATCTCTACCTAGGATGGAAAGTATATGCAATTGGAGGGAGCATGAACCCTAGCATAAAGAGCGAGTCTAACCTGTTTGTAGCCCCAGCTGGAAACAAAGAGATATTAAGAAAGATGAGTGGGAAAAACTGGAATGTTAAGTCTGTCGGTGATGCTTTGGAAAATGGAGCAAGCTTCAACGAAACAGGAACCGGTTATGTGAAACCAAACTACAACAGTGAACAGATTTTCCCAGTTGAAAATGCTAGGACTGTCAGGGCACTCACCAGATCAGCTGGAGCTCTCCGCTGCCAAGAAGGATCATTATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61087.p2 GENE.R_Transcript_61087~~R_Transcript_61087.p2 ORF type:complete len:378 (+),score=63.00,Pec_lyase_C|PF00544.15|2.7e-28 R_Transcript_61087:2209-3342(+)
MTTQILSALFLSILLAIAPNSSLAKKTGLAKWNAIDVCWRGNTNWASQRQELARCSAGYVGKMTNNVGKDVTKYVVTDPSDDAVNPKPGTLRYGVTKIPGKVWITFQKDMNIKLARPLVVGSFTTIDGRGASVHISKGGCLLLHKVTDVIIHGLRIHHCRAQPAGKVMGPGSKLIELSEMDGDAIRMIASKKVWIDHNTLYKSEDGLIDVTLGSTNITISNNWFRDHDKVMLLGHDDAFKADRDMKVTVVYNRFGPNCNQRMPRVRHGYAHVVNNLYLGWKVYAIGGSMNPSIKSESNLFVAPAGNKEILRKMSGKNWNVKSVGDALENGASFNETGTGYVKPNYNSEQIFPVENARTVRALTRSAGALRCQEGSLC*

Click here to download the sequence:
Link to NCBI Protein BLAST