Transcript Information: R_Transcript_61107.p1


Annotated TAIR IDAT5G01310.1
Annotated Gene NameAPRATAXIN-like
Annotated Gene Symbol(s)APTX
Annotation TypeOrtholog
Chromosome Positionchr5:125304-128960 | Forward length=912
E-Value5.4E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3957225392518
Replicate 24.0504674031441
Replicate 34.3588936370631
Condition 2: 8 Hour
Replicate 15.0771216032346
Replicate 25.4288230191855
Replicate 37.0986613712274
Condition 3: 24 Hour
Replicate 16.9295218666298
Replicate 24.225810758562
Replicate 35.9458725330548


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61107.p1 GENE.R_Transcript_61107~~R_Transcript_61107.p1 ORF type:complete len:762 (+),score=176.36,DcpS_C|PF11969.4|3e-22,DcpS_C|PF11969.4|2.4e+03,HIT|PF01230.19|1.5e+03,HIT|PF01230.19|3.9e-10,AAA_33|PF13671.2|7.6e-10,zf-C2HE|PF16278.1|8.2e-10,Macro|PF01661.17|2.7,Macro|PF01661.17|6.2e-06 R_Transcript_61107:62-2347(+)
ATGGCAAACGAAATGGAAATTGATGATTCCAAGCCTGAACTAGACAAAGGAAAAGTAGAGGTATTGGTGGTGATATTGGTGGGTGCACCTGGTAGTGGTAAGTCTATCTTTTGTGACAACGTCATGCGTTCTTCCTCTCGTTCCTGGGCTCGTATCTGCCAGGATACCATTAATAATGGTAAATCAGGTTCCAAAGTTCAATGCTTAAGCAGTGCAGCTGTGGCATTGCACGAAAAGAAAAGCATATTTATTGACAGGTGCAACCTGGAAAGAGAGCAGCGTGTTGATTTTGTCAAGCTTGGCAGTCCTGAAGTGGATGTGCATGCAGTGGTGCTTGATCTGCCTGCTAAGCTTTGTATTTCACGGTCTGTTCAACGTACAGGGCATGAAGGGAAGTTGCAGGGTGGAAAAGCTGCAATGGTTGTGAACAGAATGCTGCAGAAAAAGGAGCTTCCTAACCTCACCGAGGGCTTCTCTCGAATTACCTTCTGTCACAGTGAGAGTGATGTGGAAGATACTGTTACAACGTATAGCAGGCTTGGTCCATTGGATAATCTTCCATCAGGTTGTTTTGGCCAGAAGAGCCCCGATGCTATGGTCCAGCTTGGTATAATGAAGTTTCTGAAGAAGGTAGATCCTCCTGCAAATACGGGCTCTGGTTCAGGCAGTCCCCAGAGCTCTTTCTCGAGTAAGTCAACAAAAGAAACACAAGCTTGCAGTAAAGGAGGTATCCATGCTGAGATAAAGGGGAAGGATCATTTGCAAGGAGAGTCTGGTGCTGGTACCGCCGCTTTGATGAATTTAGCTGATGATACTCCTTTGGCTGAAGTTCCTACTTTAGCTTTTCCTTCAATCTCAACTGCAGACTTCCAATTTGACCATGAGAAGGCTTCTGATATCATTGTTGAGAAAGTAGAGGAGTATTTAAATAAGCTTGGAGATGCTAGGCTTGTTTTGGTAGATTTGACTTCCAAATCAAAGATCTTGTCTCTCGTTAAAGCTAAAGCCAAACTAAGAAAGATTGACTCAAATAAGTTCTTTATATTTGTGGGAGACATTACATGCCTGTACACTAAAGGAGGTTTACGCTGCAATGTGATTGCAAATGCTGCTAATTGGAGACTAAAACCAGGAGGTGGGGGTGTCAATGCTGCCATATTTGGTGCTGCTGGTCCAAGTCTAGAGGTTGCAACCAAAGAACAAGCTAAAACACTTGCTCCAGGAAGGGCTGTTGTAGTCCCTCTACCCTCAATTTCTCCGTTGTTTTGTAAGGAAGGAGTTACTCATGTCATTCACGTTCTTGGACCAAACATGAATCCACAGAGACCAAACTGCTTAAACGATGACTATAATGAAGGCGGTAAAATTCTTCGAGAGGCTTACTCATCACTTTTTGATGGTTTTGCATCCATTTTAAAGCCACACTCGAGTGCATCTAAAGTAAAAGAAGGGAAGAGTCAGTTGAAGCAGTCAGAACAGCAGGATCACACTATCAGAAGGCAACACAATCCATTGGATCAGAAGATGAAGAGAGAGGGTTTACATAATGAAGAGAGAAGTAAGAAATACAAGGGACGGAATTATGAAGTTGGATCTGGTAATGCGGGTTCAGGGACTGGGAATGAGCACCAAGAAAAGCCAAAGAGAAATGATGGTGCATCTAAGAGTTGGGGATCATGGGCTCAAGCTTTGTACAACACAGCAATGAATCCGGAGAAGCATAAGAATGATGTGCTGGAGATAAACACTGATGTTGTTCTACTGAATGATCTTTACCCAAAGGCAAAAAAGCACATTCTTGTTCTGGCACGATTGGATGGTCTGAATCAGCTGGCAGATGTGTGCCAGGAACACCTTCAGTTGTTGAAAACGATGCATGAAGTAGGGATTAACTGGGTTCAGAAGTTTTTACAGGATGATGAGTCACTAATATTCCATCTTGGATTTCATTCGGTTCCATCAATGAGGCAATTACACCTGCATGTCATCAGTCAGGATTTTGATTCCAAGCACTTGAAGCACAAGAAGCACTGGAACTCCTTCAACACTGAGTTTTTCCGAGATTCTGTCGATGTAATTGAGGAGGTTGACAAATATGGGAAGGCATTAGTAAGTGATGAGAGTCTACTATCAAAAGAACTGCGATGCCACCGGTGTAAAAGTGCACACCCTACTATACCTCGTCTGAAAGCACACATTAGCAATTGCCAAGCCTCCTTCCCTGAGACCCTGCTTGAAAATGGCCGCCTTGTACAAGCATCAGCTAAGACCGATGTTAATGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61107.p1 GENE.R_Transcript_61107~~R_Transcript_61107.p1 ORF type:complete len:762 (+),score=176.36,DcpS_C|PF11969.4|3e-22,DcpS_C|PF11969.4|2.4e+03,HIT|PF01230.19|1.5e+03,HIT|PF01230.19|3.9e-10,AAA_33|PF13671.2|7.6e-10,zf-C2HE|PF16278.1|8.2e-10,Macro|PF01661.17|2.7,Macro|PF01661.17|6.2e-06 R_Transcript_61107:62-2347(+)
MANEMEIDDSKPELDKGKVEVLVVILVGAPGSGKSIFCDNVMRSSSRSWARICQDTINNGKSGSKVQCLSSAAVALHEKKSIFIDRCNLEREQRVDFVKLGSPEVDVHAVVLDLPAKLCISRSVQRTGHEGKLQGGKAAMVVNRMLQKKELPNLTEGFSRITFCHSESDVEDTVTTYSRLGPLDNLPSGCFGQKSPDAMVQLGIMKFLKKVDPPANTGSGSGSPQSSFSSKSTKETQACSKGGIHAEIKGKDHLQGESGAGTAALMNLADDTPLAEVPTLAFPSISTADFQFDHEKASDIIVEKVEEYLNKLGDARLVLVDLTSKSKILSLVKAKAKLRKIDSNKFFIFVGDITCLYTKGGLRCNVIANAANWRLKPGGGGVNAAIFGAAGPSLEVATKEQAKTLAPGRAVVVPLPSISPLFCKEGVTHVIHVLGPNMNPQRPNCLNDDYNEGGKILREAYSSLFDGFASILKPHSSASKVKEGKSQLKQSEQQDHTIRRQHNPLDQKMKREGLHNEERSKKYKGRNYEVGSGNAGSGTGNEHQEKPKRNDGASKSWGSWAQALYNTAMNPEKHKNDVLEINTDVVLLNDLYPKAKKHILVLARLDGLNQLADVCQEHLQLLKTMHEVGINWVQKFLQDDESLIFHLGFHSVPSMRQLHLHVISQDFDSKHLKHKKHWNSFNTEFFRDSVDVIEEVDKYGKALVSDESLLSKELRCHRCKSAHPTIPRLKAHISNCQASFPETLLENGRLVQASAKTDVNG*

Click here to download the sequence:
Link to NCBI Protein BLAST