Transcript Information: R_Transcript_61123.p1


Annotated TAIR IDAT4G17720.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9862660-9864498 | Reverse length=313
E-Value7.1E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.466484931257
Replicate 234.661490352045
Replicate 339.734871640253
Condition 2: 8 Hour
Replicate 134.129739130378
Replicate 236.789272079492
Replicate 336.151112771888
Condition 3: 24 Hour
Replicate 140.464738437657
Replicate 235.793590545881
Replicate 337.600386543134


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61123.p1 GENE.R_Transcript_61123~~R_Transcript_61123.p1 ORF type:5prime_partial len:358 (+),score=101.57,RRM_1|PF00076.18|9.7e-06,RRM_1|PF00076.18|1e-06,RRM_6|PF14259.2|5.6e-06,RRM_6|PF14259.2|1.1e-05,RRM_6|PF14259.2|1.1e+04,RRM_3|PF08777.7|0.0037,RRM_3|PF08777.7|0.03,RRM_3|PF08777.7|6.9e+03 R_Transcript_61123:2-1075(+)
GTAAGGACAGTAAAGGTTAGCAATGTTTCTTTAAAAGCATCTGAACGAGAGCTTAAGGAGTTCTTTTCTTTCTCAGGCGATATTCAATATGTGGAGACTAAGAGTGAGGGTGATGAGTCTCTAACTGCATATGTTACCTTCAAGGATGCACAAGCAGCAGAAACTGCGGTTTTACTCACGGTAAAGACAGTAAAAGTTAGCAATGTTTCTTTAAAAGCATCTGAACGAGAGCTTAAGGAGTTCTTTTCTTTCTCAGGCGATATTCAATATGTGGAGACTAAGAGTGAGGGTGATGAGTCTCTAACTGCATATGTTACCTTCAAGGATACACAAGGAGCAGAAACTGCTGTTTTACTCACGGGTGCAACTATAGTAGATAAAACAGTCACCATAACTTTGGATCCGGACTATGAGTTACCTCCTGCTGCTTTGGCACCACCAGCTGATGCTCAAAGCCAAAATCCTGCTGGAGCTCAATCTGCTCTGCGTAAGGCAGAGGATGTCGTCACCAGCATGTTAGCCAAGGGCTTTGTCTTGGGGAAAGATGCAGTCAACAAGGCAAGATCCCTTGATGAAAAGCACCAGCTAACCTCAACCGCCTCTACCAAGATCGCCTCACTTGACCAGAAGATGGGTTTGACTGAGAAGATCAGCATGGGAACTTCTGCTGTTAACAACAAAGTGAAGGAAATGGATCAGAAATTCCAGGTCTCTGAGAAAACAAAAACAGCTTTCGCCGTTGCTGAGGAGAAAGTCAGCACCGCTGGATCCGCCATTATGAAGAATCGGTATGTGCTGACTGGAGCGACTTGGGTGACAGGCGCTTTTAACAGGGTTGCAAAAGCAGCTGGAGATGTTGGGCAGAAGACAAAAGAGAAAGTGGGGGTGGCTGAAGAGGAGCAGAAGAGAAAAATAGTGGATGACTTTGCTCAAGTTCACTTGTCGGAGTCTGACTCCCCTAAGGCTGCATCCCCCAAGGCTGCATCCCCTACAGCGGCTACGTTGCCCAAGTCTTCTGGCCCAGAAGAGCAGCAGCCTAAGAAGCCTGAACCTGCACAAGGTTTGATCCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61123.p1 GENE.R_Transcript_61123~~R_Transcript_61123.p1 ORF type:5prime_partial len:358 (+),score=101.57,RRM_1|PF00076.18|9.7e-06,RRM_1|PF00076.18|1e-06,RRM_6|PF14259.2|5.6e-06,RRM_6|PF14259.2|1.1e-05,RRM_6|PF14259.2|1.1e+04,RRM_3|PF08777.7|0.0037,RRM_3|PF08777.7|0.03,RRM_3|PF08777.7|6.9e+03 R_Transcript_61123:2-1075(+)
VRTVKVSNVSLKASERELKEFFSFSGDIQYVETKSEGDESLTAYVTFKDAQAAETAVLLTVKTVKVSNVSLKASERELKEFFSFSGDIQYVETKSEGDESLTAYVTFKDTQGAETAVLLTGATIVDKTVTITLDPDYELPPAALAPPADAQSQNPAGAQSALRKAEDVVTSMLAKGFVLGKDAVNKARSLDEKHQLTSTASTKIASLDQKMGLTEKISMGTSAVNNKVKEMDQKFQVSEKTKTAFAVAEEKVSTAGSAIMKNRYVLTGATWVTGAFNRVAKAAGDVGQKTKEKVGVAEEEQKRKIVDDFAQVHLSESDSPKAASPKAASPTAATLPKSSGPEEQQPKKPEPAQGLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST