Transcript Information: R_Transcript_61197.p1


Annotated TAIR IDAT3G05830.2
Annotated Gene NameEncodes alpha-helical IF (intermediate filament)-like protein.
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1736796-1738565 | Forward length=349
E-Value5.5E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4082847273241
Replicate 23.6937935917561
Replicate 36.5750820877845
Condition 2: 8 Hour
Replicate 12.9473726325388
Replicate 26.6254464714624
Replicate 39.9161576537299
Condition 3: 24 Hour
Replicate 16.8023132526531
Replicate 24.2885225620567
Replicate 34.4586065102939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61197.p1 GENE.R_Transcript_61197~~R_Transcript_61197.p1 ORF type:3prime_partial len:108 (+),score=34.91 R_Transcript_61197:161-481(+)
ATGGGTTCGGTTCCAGAGAGACCCACATCATCATCATCATCATCATCAGCATCAACATGTGGGAGAGAAATTGATCCTTTGTTAAGGGATTTGAGTGAGAAAAAACAAAGCTTTCGCAAAAATGTTGTTTCCTTAGCTGCTGAGTTGAAGGAGGTCCGGACCCGCTTGGCTTTACAAGAACAAACCTATGCCAAAGAAACCCTAACCAGACAGGAAGCTGAGGCAAAAGCTAAGGGAATGGAAGAGGAAGTATATAGATTACATAAAACCTTGGAGGAGAAAAATATGCAATTACAGGCATCTTCTTCTAATGCTGAAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61197.p1 GENE.R_Transcript_61197~~R_Transcript_61197.p1 ORF type:3prime_partial len:108 (+),score=34.91 R_Transcript_61197:161-481(+)
MGSVPERPTSSSSSSSASTCGREIDPLLRDLSEKKQSFRKNVVSLAAELKEVRTRLALQEQTYAKETLTRQEAEAKAKGMEEEVYRLHKTLEEKNMQLQASSSNAEK

Click here to download the sequence:
Link to NCBI Protein BLAST