Transcript Information: R_Transcript_61220.p1


Annotated TAIR IDAT3G05090.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)LRS1
Annotation TypeOrtholog
Chromosome Positionchr3:1418573-1422723 | Reverse length=753
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.889371473174
Replicate 210.099137945978
Replicate 314.260419866543
Condition 2: 8 Hour
Replicate 111.970154161628
Replicate 214.506731993954
Replicate 321.696289496452
Condition 3: 24 Hour
Replicate 116.578966949495
Replicate 214.481893452397
Replicate 316.695470678603


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61220.p1 GENE.R_Transcript_61220~~R_Transcript_61220.p1 ORF type:complete len:763 (+),score=138.91,DUF3337|PF11816.4|1e-29,WD40|PF00400.28|0.13,WD40|PF00400.28|0.79,WD40|PF00400.28|0.0028,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.0037,WD40|PF00400.28|0.0012,WD40|PF00400.28|0.47,WD40|PF00400.28|1.5e+03,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|3.3e+03 R_Transcript_61220:333-2621(+)
ATGCATCGCGTCGGTAGCGCGGGGAATGCATCTGGTTCAACTCGCCCTCGCAAGGAGAAGAGATTGACATATGTCCTAAATGCTGCCGATGACACAAAGCATTGTGCCGGTATAAATTGCTTGGCTGTGTTGAACTCAAGTGTCTCCGGTGGGAATAATTGCCTATTTTCTGGAAGCCGAGATGGAACACTGAAGAGATGGATGATTGATGAAGATGTAGCGACCTGCTCAGCTACATTCGAATCGCATGTGGATTGGGTAAATGATGCTGTCCTTGTTGGCAATCATACACTTGTGTCCTGTTCTTCAGATACCACACTAAAGACATGGAATTGCTTGTCCAATGGAGTATGTACGAAGACTTTGCGTCAGCACTCTGACTATGTTACGTGTCTGGCCGCAGCAGAAAACAATAGCAATATTGTTGCCTCTGGTGGCCTCGGTGGGGAGGTTTTTATATGGGATATTGAAGCTGCTCTTGCTCCCATTTCGAAATCAAATGACGGGACGGAAGAAGAGGCTTCAAATGGAACTAATGGTTTTGGGACTAATCTACCCATTACCAGTTTACGTACTATCAGCTCTAGCAATAACATCTCTTTGCATTCTACTCCAAATCAAGGCTATGTGCCTATTGCCGCCAAAGGCCACAAGGAATCAGTTTATGCATTGGCTATGAATGACAGCGGTACTATACTAGTTTCTGGTGGAACTGAAAAGGTGGTGCGTGTTTGGGACCCTAGATCTGGTTCGAAGACCATGAAGTTGAGGGGACATACGGACAATGTTAGGGTTTTGCTCTTGGATTCAACGGGCAGGTATTGTTTATCAGGTTCGTCTGATTCAATGATCAGACTATGGGATCTTGGTCAGCAGCGCTGTGTGCATTCATATGCTGTTCATACAGATTCTGTCTGGGCTCTTGCAAGCACAGCATCTTTCAGCCATGTGTACAGTGGTGGAAGGGATCAATCGTTATATTTGACAGACTTATCTACAAGAGAGAGCATTTTGCTTTGCACAGAAGAGCACCCTATTTTACAGTTGGCCTTACACGATGAGAGCATATGGGTTGCAACCACAGATTCCTCTGCTCATCAATGGTCAGCTGAAGGAAATAATCCTCAGAAGGTTTTCCAGAAAGGAGGTTCCTTTTTGGCTGGAAACTTGTCATTTTCTAGAGCAAGGGCATCCCTCGAGGGATCTACTCCTGTTCCGGCGTACCGGCAGCCTACATTAACAATACCTGGAACTCCAGCTATTGTGCAGCATGAAATATTGAATAACAGAAGGCATGTGCTTACCAAGGACACTGCTGGCTCTGTGAAGCTATGGGAAATCACAAGGGGCATTGTGGTTCAAGACTATGGAGAGGTTTCATTTGACGAAAAAAAGAAGGAGCTATTTGAGATGGTGAGTATTCCTGCATGGTTCACTGTGGACACCCGTCTTGGGAGCTTGTCAGTTCATTTGGATACACCACAATGCTTTTCAGCAGAAATGTATTCTGCTGACCTAAACATTGCAGGAAAACCTGAGGATGATAAGGTTAATCTGGCCCGAGAAACACTCAAAGGCTTGTTAGCTCATTGGTTAACGAAACGAAAACAAAGATCAGGATCCCAATCATCAGCAAATGGTGAAGTTCAATCTGTGAAGGATATCTCTACCCGAAGTACGACACACTCACGGATTGAAGTTGATGGTGCTGCAGAAAATCACTCAATGGTGTATCCTCCATTTGAGTTTTCTGCTGTTTGCCCACCTTCCATTATTACCGAGGGCTCTCATGGTGGTTCATGGCGAAAAAAAATTACTGATTTGGATGGAACTGAGGATGAGAAGGACTTCCCCTGGTGGGTTTTGGATTGTGTCTTGAACAATCGCCTACCGCCCAGAGAGAATACCAAGTGCAGTTTTTTCCTTCATCCATATGAAGGTTCCACTATACAAATCCACACCCAAGGGAAGTTGAGTGCTCCTCGCATATTAAGAATACACAAGGTTATTAACTATGTACTGGAGAAGATGGTTCTTGACAAATCATTAGAAGGTGTTACTGGAGATGGAACATTTGCACCTGGATTGACTGGAGGGCCATTGAGTGCTGGAGGAGATGGGTCTCTCAGGTCTGGGTTGAGACCTTGGCAGAGGCTAAAGCCTTCCATTGAAATCTTATGCAATAATCAGGTTTTATCTCCTGATATGAGCTTGGCAACGGTGCGAGCTTATATTTGGAAGAAACCCGAGGACCTGGTACTTCATTATCGTCTGATGCAGGGCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61220.p1 GENE.R_Transcript_61220~~R_Transcript_61220.p1 ORF type:complete len:763 (+),score=138.91,DUF3337|PF11816.4|1e-29,WD40|PF00400.28|0.13,WD40|PF00400.28|0.79,WD40|PF00400.28|0.0028,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.0037,WD40|PF00400.28|0.0012,WD40|PF00400.28|0.47,WD40|PF00400.28|1.5e+03,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|3.3e+03 R_Transcript_61220:333-2621(+)
MHRVGSAGNASGSTRPRKEKRLTYVLNAADDTKHCAGINCLAVLNSSVSGGNNCLFSGSRDGTLKRWMIDEDVATCSATFESHVDWVNDAVLVGNHTLVSCSSDTTLKTWNCLSNGVCTKTLRQHSDYVTCLAAAENNSNIVASGGLGGEVFIWDIEAALAPISKSNDGTEEEASNGTNGFGTNLPITSLRTISSSNNISLHSTPNQGYVPIAAKGHKESVYALAMNDSGTILVSGGTEKVVRVWDPRSGSKTMKLRGHTDNVRVLLLDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSVWALASTASFSHVYSGGRDQSLYLTDLSTRESILLCTEEHPILQLALHDESIWVATTDSSAHQWSAEGNNPQKVFQKGGSFLAGNLSFSRARASLEGSTPVPAYRQPTLTIPGTPAIVQHEILNNRRHVLTKDTAGSVKLWEITRGIVVQDYGEVSFDEKKKELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYSADLNIAGKPEDDKVNLARETLKGLLAHWLTKRKQRSGSQSSANGEVQSVKDISTRSTTHSRIEVDGAAENHSMVYPPFEFSAVCPPSIITEGSHGGSWRKKITDLDGTEDEKDFPWWVLDCVLNNRLPPRENTKCSFFLHPYEGSTIQIHTQGKLSAPRILRIHKVINYVLEKMVLDKSLEGVTGDGTFAPGLTGGPLSAGGDGSLRSGLRPWQRLKPSIEILCNNQVLSPDMSLATVRAYIWKKPEDLVLHYRLMQGR*

Click here to download the sequence:
Link to NCBI Protein BLAST