Transcript Information: R_Transcript_6124.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value6E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69276914514609
Replicate 20.41576832507521
Replicate 30.4913986613036
Condition 2: 8 Hour
Replicate 10.80811435469456
Replicate 20.55348717428677
Replicate 30.65896936245629
Condition 3: 24 Hour
Replicate 10.90922008822591
Replicate 20.50952743311565
Replicate 30.65012984218507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6124.p1 GENE.R_Transcript_6124~~R_Transcript_6124.p1 ORF type:5prime_partial len:606 (+),score=74.02,RVT_3|PF13456.2|3e+03,RVT_3|PF13456.2|1.6e-21,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|2.9e-19,zf-RVT|PF13966.2|1.1e+04 R_Transcript_6124:3-1820(+)
ATTGGCCGGTCCAAAAAAAAGGCTTTTCTCCCTATTAAAGACAGGGTGCAAAAGAAGCTTCAAGGGTGGATGGATAAGTATCTCTCATGGTCAGGTAAGGAAGTTCTTATTAAGGCAGTAGCCCAAGCTATTCCAACATATGCTATGAGTGTATTCAAACTCCCAGAAGTTTTTTGTAATGATTTGCAACAACTTGTTCGCAAGTTTTGGTGGGGACATAAGGATGGGAAAAGGAAGATTCATTGGGTTAAATGGGGGAGACTTTGCAAATCAAAAGATGATGGTGGTTTGGGCTTTCGAGACTTAGTGGCTTTTAATGAGGCAATGCTGGCAAAACAGGTATGGAGGCTTCTTAAAGACCCGGGCACACTTAGTGCAAGACTCTTGAAGGCCAAATATTACCCTCAGAGCCATATATGTGATGCGGTCTTGGGGCACAAACCTAGCTATTTATGGAGGAGCTTGATGGGTGTACAAAACATTGTGCAAATGGGGCTCCGATGGGTGGTAGGTAATGGAGACTCAATTCGGGTTTGGAAAGACCCATGGCTTCCTAGGCCTACAACTTTCAAACCCATTCTTAATGTGGCTGCTCTAGATGGGGATATGAGGGTTGGGGAGTTAGTAGATAAGGAGCAAGGGAGATGGAACGAGCAACTTATTCGAGCCATTTTTCTTCCCATGGATGCAAACCTTATCCTTAATATCCCTCTATGCTTGACATGGCCTAATGATCGCCTCGTTTGGCACTATGAGTCCACGGGATGTTTCACAGTGAAGTCCGCTTACCGCCTTATTATGAACTTGAGAGATAGTGATGGGGTGGGGTCAAGTGCAGGACCACACATGAATTTTTGGAGATGCATTTGGAGGCTAGACATCCCCCCACGTATTAAAAACTTTGCATGGAGGGCCACTGCTGATGTTTTGCCAACTAATTATAATATAGCTAAGAGGGTGCCACATAGGGAGTTTGGATGCCAAATGTGTGGGGCGCAAGAGGACACAGCGTTACATGCACTCTTATCATGCCCATGGTCTCGTGCTCTCTGGGAAGGTAGTGGTTGGCCGCAAGTTTTTCTTGAAGGGAATTTTCGGTGTGTTCGTGATTGGTGGGAGAATATTTATGGGGCAGCGGATATGGACGACTTTGGAGCTTTTGTTGCAACAGCATGGGCAATCTGGGGAGAGCGGTGCAAGCTATTGTATGGGGAGAACCATGAACAGTGTATGCAGGTGTGTGAGAACGCAAGAAAATTTGTGGTGAGTTACAGAGAAGCAAGAATGAGGACCGAAAGTCTACAAGCTGCCAAAGCTTTTTGGAGACCAGCTGATCCTGGCATTTGGAAATTGAACGTTGACGCAGGCAAATTGGGAGACTGGGGGGTTGGCTGGGGTATGGTAGTGAGGGATGCAACGGGTGAGCCAGTGGCTATGGGAGTACACCAACATGAGGGACATTTCAAAGCGGAACTGGAGGAGGCTAGAGCAATTCTTTTTGGCGTACGCTCCGCTTGGGAAACAGGCTATAGATCACTAGTGGTGGAATCCGATTGTCTCAGTGTTATCTCAAAGCTACGGAAACATCCAACCATCCTCTCTCCTATTGGTTTTATTTTGGAGGACATTCATGCGTGGGCATCAAAATTTGATTTTATTGTTTTTTCACATGTATACAGGGAAGGCAACAGAGTTGCTCATTGTCTTGCTCAATTCCAACCCTATAAGGTGGAAGAGAGATTTTGGTTGGAAGATATGCCAACCAATTTAGTAGAATTGGCGGATATTGATTTATGTAATTTTTTAGCCAATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6124.p1 GENE.R_Transcript_6124~~R_Transcript_6124.p1 ORF type:5prime_partial len:606 (+),score=74.02,RVT_3|PF13456.2|3e+03,RVT_3|PF13456.2|1.6e-21,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|2.9e-19,zf-RVT|PF13966.2|1.1e+04 R_Transcript_6124:3-1820(+)
IGRSKKKAFLPIKDRVQKKLQGWMDKYLSWSGKEVLIKAVAQAIPTYAMSVFKLPEVFCNDLQQLVRKFWWGHKDGKRKIHWVKWGRLCKSKDDGGLGFRDLVAFNEAMLAKQVWRLLKDPGTLSARLLKAKYYPQSHICDAVLGHKPSYLWRSLMGVQNIVQMGLRWVVGNGDSIRVWKDPWLPRPTTFKPILNVAALDGDMRVGELVDKEQGRWNEQLIRAIFLPMDANLILNIPLCLTWPNDRLVWHYESTGCFTVKSAYRLIMNLRDSDGVGSSAGPHMNFWRCIWRLDIPPRIKNFAWRATADVLPTNYNIAKRVPHREFGCQMCGAQEDTALHALLSCPWSRALWEGSGWPQVFLEGNFRCVRDWWENIYGAADMDDFGAFVATAWAIWGERCKLLYGENHEQCMQVCENARKFVVSYREARMRTESLQAAKAFWRPADPGIWKLNVDAGKLGDWGVGWGMVVRDATGEPVAMGVHQHEGHFKAELEEARAILFGVRSAWETGYRSLVVESDCLSVISKLRKHPTILSPIGFILEDIHAWASKFDFIVFSHVYREGNRVAHCLAQFQPYKVEERFWLEDMPTNLVELADIDLCNFLANE*

Click here to download the sequence:
Link to NCBI Protein BLAST