Transcript Information: R_Transcript_61348.p1


Annotated TAIR IDAT4G37190.1
Annotated Gene NameLOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17507155-17509512 | Forward length=562
E-Value2E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3702441394108
Replicate 23.9494648693037
Replicate 35.19268488916
Condition 2: 8 Hour
Replicate 13.8579015511737
Replicate 22.9478976060727
Replicate 34.9318684804588
Condition 3: 24 Hour
Replicate 16.2377321888778
Replicate 24.7514544876806
Replicate 35.8062239121191


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61348.p1 GENE.R_Transcript_61348~~R_Transcript_61348.p1 ORF type:5prime_partial len:622 (+),score=112.71,Tubulin_3|PF14881.2|8.8e+03,Tubulin_3|PF14881.2|9.7e-25,Misat_Tub_SegII|PF10644.5|8.7e-19 R_Transcript_61348:3-1868(+)
CTAATCTCCCTTCCTTTAAACTTCCCAACCTCCAAGTCAAATTCTCTACAGACCGCCTACCAAAAAAAAAAAAAAAAAAAAAAAACTCTACAGACCGTACTCTTCCTTGCGAGGGTTTCTACGATTGGCGCTCAAACAAATTCAGTGAACTGCCCATCCAGCTCTAAGCCAAAGTTGAAGGGGCGCAATGAGAGAAGTGCTCACTGTTCAAGTTGGAACTTCCAGGATGAATTGCTTGGTTTAGCTGGTGATCCTGAGAGTGATCTTGCATTCAAGAATCATGGCTTAAACATGGATGTGCTGTATCGTACAGGAGAAACTCAGGAGGGGGTTCTTACTTATACGCCGCGGTTAGTTTCTATTAATTATCAAGGTTCCCTTGGATCAATGAGTTCATTTGGTACATTATATAATCAAACTCCAAAAGTACCATCTCCTGTGGCCACCTGGAGTGGCAGTCTTTCCACCCACCATTCTCGGCCTCACAAAAGGAATTTATTCTTGCAAAGTTTATATGAGGATGAGCAGAGACAATTAACTGGTACAGACAACAGACTTGCCGATTCGCAGGATGAAAATCAAGACAGGGACATTGTGCAATGTTTGGAAAATGACGTGCAATTCTGGACTGACTTCTCGAAAGTCCATTATCATCCACAGAGCTTATATGAATTGAGTGGGTTATGGATGGATGTTCAGAACTTTAATAATTATGGCATTGGGAAGGATGTTTTTTCTGAAGGTCTTCAGGGAGAGGAGATGAATGACAGGATTCGTTTTTTCATGGAAGAGTGTGATCATATACAGGGAATTCAATTTGTACTGGATGATTCAGGGGGGTTTTCCAGTGTTGCAGCAGATTTTTTGCAGAATATTGTAGATGACTACACCCATGTTCCTTTATTGCTTTATACTGTTCGTGATCCTGGTTCTTATATGAATTCTAGAAGTCAAAAAAGGAACATCTCCAGGGATCTTCATGATGCAGTTTCTTTTGCAAGACTATCTCCATTCTGCAAGTTGATTGTACCTGTTGGTTTACCCTTTCTTAATTGCAAAGCTTCTCCGTATCTGTGTGTTAATGATGAGAAGCTGTACCATTCCAGCGCTGTCTATGCTGCTGCCCTTCACTCCCTGAGTTTACCTAGTCGCATGGACATACTGGGGCCCACTGCAATGTCAGATTCCATTTCTGGTGCCTTGGATATCAATGGCCTTGTACAAATGCTATCAGGTCAACATCGACAGAACACGGTTGCCATATTGGATGCTACCATGCCAGCACCTTCGCTTACTGGGAAACAAGCTGATCAACCATTATTGAGTAATATGCGGCCATTAACACCAGAATTATCAGAAGGAATAGGGGATATGCAGTCTGTGGAGGCATTGGTTATACATGGAGCTCTAGAGCCAGGGGGGAAACGAGCTTCGGTCTCAGAGGTCCAACAGACAGTTGCTGCTGTATATGGAGTGACAATGACAAGGCCGAGATTCTATCACCTATCTGCGGCAACTTGTCCTCTCCCAATACCCTTGCCATTTCCTTCGATATTTGCAGATGTTGTTGGGCAACGGGGTGAGCTACTTGGTACCCCGACTCCAGATTCTGTCGCAAAGGGTTCTCTTGATGTCCATTCCATCCCTATGGCTGCAAGACTGCGGTCCAGCAGTGCTATCTTGCCATTCTTGTCGAAGAGGCTGGAAAACCTTCAGAAATTTGGTATTCGACGAGGTGCACTGGGTGGAGAATTGCTCAGAGGATGGGGTTTTGGAAAGGAGGAACTAGAAGATATGGGAGAGACTCTCTCTAATATGGTGAAGGCTCTTGATCCTTTCTCCGAGGAATTGTCTGATTCAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61348.p1 GENE.R_Transcript_61348~~R_Transcript_61348.p1 ORF type:5prime_partial len:622 (+),score=112.71,Tubulin_3|PF14881.2|8.8e+03,Tubulin_3|PF14881.2|9.7e-25,Misat_Tub_SegII|PF10644.5|8.7e-19 R_Transcript_61348:3-1868(+)
LISLPLNFPTSKSNSLQTAYQKKKKKKKTLQTVLFLARVSTIGAQTNSVNCPSSSKPKLKGRNERSAHCSSWNFQDELLGLAGDPESDLAFKNHGLNMDVLYRTGETQEGVLTYTPRLVSINYQGSLGSMSSFGTLYNQTPKVPSPVATWSGSLSTHHSRPHKRNLFLQSLYEDEQRQLTGTDNRLADSQDENQDRDIVQCLENDVQFWTDFSKVHYHPQSLYELSGLWMDVQNFNNYGIGKDVFSEGLQGEEMNDRIRFFMEECDHIQGIQFVLDDSGGFSSVAADFLQNIVDDYTHVPLLLYTVRDPGSYMNSRSQKRNISRDLHDAVSFARLSPFCKLIVPVGLPFLNCKASPYLCVNDEKLYHSSAVYAAALHSLSLPSRMDILGPTAMSDSISGALDINGLVQMLSGQHRQNTVAILDATMPAPSLTGKQADQPLLSNMRPLTPELSEGIGDMQSVEALVIHGALEPGGKRASVSEVQQTVAAVYGVTMTRPRFYHLSAATCPLPIPLPFPSIFADVVGQRGELLGTPTPDSVAKGSLDVHSIPMAARLRSSSAILPFLSKRLENLQKFGIRRGALGGELLRGWGFGKEELEDMGETLSNMVKALDPFSEELSDSD*

Click here to download the sequence:
Link to NCBI Protein BLAST