Transcript Information: R_Transcript_61350.p1


Annotated TAIR IDAT4G37190.1
Annotated Gene NameLOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17507155-17509512 | Forward length=562
E-Value7.2E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2063971190175
Replicate 28.1264139965007
Replicate 37.9030250550648
Condition 2: 8 Hour
Replicate 18.8766620736948
Replicate 27.7930218675936
Replicate 310.45863379003
Condition 3: 24 Hour
Replicate 111.177356233453
Replicate 28.7680276149931
Replicate 311.538001945282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61350.p1 GENE.R_Transcript_61350~~R_Transcript_61350.p1 ORF type:complete len:571 (+),score=120.13,Misat_Tub_SegII|PF10644.5|4.2e-32,Tubulin_3|PF14881.2|1.4e-25 R_Transcript_61350:158-1870(+)
ATGAGAGAAGTACTCACTGTTCAAGTTGGAACTTTTGCCAATTTCATTGGTTCTCACTTTTGGAACTTCCAGGATGAATTGCTTGGTTTAGCTGGTGATCCTGAGAGTGATCTTGCATTCAAGAATCATGGCTTAAACATGGATGTGCTGTATCGTACAGGAGAAACTCAGGAGGGGGTTCTTACTTATACGCCGCGGTTAGTTTCTATTAATTATCAAGGTTCCCTTGGATCAATGAGTTCATTTGGTACATTATATAATCAAACTCCAAAAGTACCATCTCCTGTGGCCACCTGGAGTGGCAGTCTTTCCACCCACCATTCTCGGCCTCACAAAAGGAATTTATTCTTGCAAAGTTTATATGAGGATGAGCAGAGACAATTAACTGGTACAGACAACAGACTTGCCGATTCGCAGGATGAAAATCAAGACAGGGACATTGTGCAATGTTTGGAAAATGACGTGCAATTCTGGACTGACTTCTCGAAAGTCCATTATCATCCACAGAGCTTATATGAATTGAGTGGGTTATGGATGGATGTTCAGAACTTTAATAATTATGGCATTGGGAAGGATGTTTTTTCTGAAGGTTTTCGGGGAGAGGATATGAATGACAGGATTCGTTTTTTCATGGAAGAGTGTGATCATATACAGGGAATTCAATTTGTACTGGATGATTCAGGGGGGTTTTCCAGCGTTGCGGCAGATTTTTTGCAAAATATTGTAGATGACTACACCAATGTTCCTTTATTGCTTTATACTGTTCGTGATCCTGGTTCTTATATGAATTCTAGAAGTCAAAAAAGGAACATCTCCAGGGATCTTCATGATGCAGTTTCTTTTGCAAGACTATCTCCATTCTGCAAGTTGATTGTACCTGTTGGTTTACCCTTTCTTGATTGCAAAGCTTCTCCATATCTGTGTGTTAATGATGAGAAGCTGTACCATTCCAGCGCTGTCTATGCTGCTGCCCTTCACTCCCTGAGTTTACCTAGTCGCATGGACATACTGGGGCCCACTGCAATGTCAGATTCCATTTCTGGTGCCTTGGATATCAATGGCCTTGTACAAATGCTATCAGGTCAACATCGACAGAACACGGTTGCCATATTGGATGCTACCATGCCAGCACCTTCGCTTACTGGGAAACAAGCTGATCAACCATTATTGAGTAATATGCAGCCATTGACACCAGAATTATCAGAAGAAATAGAGGATATGCAGTCTGTGGAGACATTGGTTATACATGGAGCTTTAGAGCCAGGAGGGAAACGAGCATCGGTCTCAGAGGTCCAACAGACAGTTGCTGCTGCATATGGAGTAACAATGACAAGGCCTAGATTCTATCACCTATCTGTGGCAACTTGTCCTCTCCCAATACCCTTGCCATTTCCTTCGATATTTGCAGATGTTGTTGGGCAACGGGGTGAGCTACTTGATACCCCAACACCAGATTCTGTTGCAAAGGGTTCTCTTGATGTCCATTCCATCCCTATGGCTGCAAGACTGCGGTCCAGCAGTGCTATCTTGCCATTCTTGTCGAAGAGGCTGGAAAACCTTCAGAAATTCGGTATTCGACGAGGTGCATTGGGTGGAGAATTGCTCAGAGGGTGGGGTTTTGGAAAGGAGGAACTAGAAGATATGGGAGAGACTCTCTCTAATATGGTGAAGGCTCTTGATCCTTTCTCCGAGGAATTGTCTGATTCAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61350.p1 GENE.R_Transcript_61350~~R_Transcript_61350.p1 ORF type:complete len:571 (+),score=120.13,Misat_Tub_SegII|PF10644.5|4.2e-32,Tubulin_3|PF14881.2|1.4e-25 R_Transcript_61350:158-1870(+)
MREVLTVQVGTFANFIGSHFWNFQDELLGLAGDPESDLAFKNHGLNMDVLYRTGETQEGVLTYTPRLVSINYQGSLGSMSSFGTLYNQTPKVPSPVATWSGSLSTHHSRPHKRNLFLQSLYEDEQRQLTGTDNRLADSQDENQDRDIVQCLENDVQFWTDFSKVHYHPQSLYELSGLWMDVQNFNNYGIGKDVFSEGFRGEDMNDRIRFFMEECDHIQGIQFVLDDSGGFSSVAADFLQNIVDDYTNVPLLLYTVRDPGSYMNSRSQKRNISRDLHDAVSFARLSPFCKLIVPVGLPFLDCKASPYLCVNDEKLYHSSAVYAAALHSLSLPSRMDILGPTAMSDSISGALDINGLVQMLSGQHRQNTVAILDATMPAPSLTGKQADQPLLSNMQPLTPELSEEIEDMQSVETLVIHGALEPGGKRASVSEVQQTVAAAYGVTMTRPRFYHLSVATCPLPIPLPFPSIFADVVGQRGELLDTPTPDSVAKGSLDVHSIPMAARLRSSSAILPFLSKRLENLQKFGIRRGALGGELLRGWGFGKEELEDMGETLSNMVKALDPFSEELSDSD*

Click here to download the sequence:
Link to NCBI Protein BLAST