Transcript Information: R_Transcript_61363.p1


Annotated TAIR IDAT1G54710.1
Annotated Gene NameHomolog of yeast autophagy 18 (ATG18) H
Annotated Gene Symbol(s)ATATG18H, ATG18H
Annotation TypeOrtholog
Chromosome Positionchr1:20417019-20420733 | Reverse length=927
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.044723725721
Replicate 26.2860614280974
Replicate 39.8904854793978
Condition 2: 8 Hour
Replicate 17.7546883896062
Replicate 210.99827487708
Replicate 315.970459853375
Condition 3: 24 Hour
Replicate 19.7722641763547
Replicate 27.7709975317105
Replicate 39.6956736647661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61363.p1 GENE.R_Transcript_61363~~R_Transcript_61363.p1 ORF type:complete len:982 (+),score=190.18,BCAS3|PF12490.4|6.3e-71 R_Transcript_61363:295-3240(+)
ATGAAACAACACCAAACAAAGACTAACAATAACAACAACAGTAATAAGACAAATGGGTTTACACGTAACTCATTCAAGTTCATCTCATCTTGTATCAAGACTGTCTCTTCTGGTGTCCGCTCTGCTAGTGCCTCCGTTGCTGCTTCCATTTCTTCTGATTCTAATGACATCAAAGACCAGGTGCTCTGGGCTTGCTTTGACAGGATAGAACTCAGTCCATCTAGCTTCAAGCGTGTTCTGTTGCTTGGCTATACTAATGGCTTTCAAGTTCTCGATGTTGATAATGCTTCTACTGTCAGTGAGCTGGTTTCAAGGCGTGATGATCCGTGTACATTTCTGCAAATACAGCCCTTCCCTGCCAAATCTGAGGGCGTTGAAGGATTCAGAGCGTCACATCCTTTACTATTGGTTGCTGCAGGAGATGAAACAAACGGTCCAGATCCCACTCAGAGGAGGAGAGATGGGTCAGTTAGGGATGGCTTTGTTGACTCCCATACAGGGAACGCTGTCAGTTCTCCCACTGCTGTTCGTTTTTATTCTTTGAGATCTCACAACTATGTTCATGTTCTGAGATTCCGTTCTGCGGTATACACCGTTAGGTGCAGTCCCCATATAGTTGCTGTGGGACTTGCTTCACAAATATACTGCTTTGATTCGGTCACTCTAGAGAATAAATTCAGCGTTTTGACCTATCCTGTTCCTCAAATGGTTGGCCAAGGAACTGTCGGTATAAACATCGGTTATGGTCCTATGGATGTTGGACCTCGGTGGTTAGCATATGCTTCTAATAACCCGTTGTCAAACACAGGACGTTTGAGTCCTCAAAGTCTGACTCCATCTCCTGGTGTAAGCCCTTCAACTTCGCCCAGCAGCGGAAGTTTGGTAGCAAGGTATGCTATGGAGTCTAGCAAACAATTGGCTGCTGGACTGATTAATCTTGGTGACATGGGCTACAAAACATTCTCCAAGTACTGTCAAGAGCTGCTTCCTGATGGTTCAAGTTCTCCTGTAACGTCCAGTTCCGGATGGAAAGTTACAAAGACTTCCGGAAGTTCACCAGAGATGGAGACTGCTGGGATGGTTATTGTGAAAGATTTTGTATCTAGAGCTGTCATAACGCACTTTAGGGCTCACACAAGTCCTATCTCTGCCCTTTGTTTTGATCCGAGTGGGACACTTCTGGTTACTGCATCAATACATGGTAATAATATAAATATCTTTCGAATTATGCCGTCATGCTCACAGAATTGTTCAGGCAATCAGGGCTATACTTGGACTGCTTCTCATGCGCATCTGTACAAACTTCATCGTGGCATAACATCTGCTGTCATTCAGGATATCTGTTTTAGCCAATATAGCCAATGGGTAGCTATAGTTTCATCCAAGGGAACTTGTCACATTTATGTTTTATCGCCTTTTGGTGGGGAGTGTGGTCTTCAAGTTCAAACTACTCATGCTGATGGGCCCACCCTTGTACCTTTTTTATCTTCTCCATGGTGGTCAACTTCATCCTACACTGTAAATCAACAGTCGTTTTCTGCTCCTCCACCTCCAGTTACTCTATCTGTGATTAGTAGGATAAGAACTGGTAACTCTGGGTGGCTCAACACAGTCAGCAATGCTGCATCATCTGCAGCTGGTATGGTTTCCTCACCATCGTGTGCTGTTTCTGCTGTTTTCCATTGTTCGATGCCTAATGTCTTGCAGCCTGGACGCTCTAAGACAAACACCTTGGAGCATCTTTTGGTTTACTCTCCCTCGGGTCATCTTATCCAATATGAACTTCTCCCATCTATTGGGGCAGAGGCAAGTGATGTAGCCTCTAGGAATACATCAGGATCACTGATGCAAGTACAAGATGAGGACTTAAGGGTGAAGGCTGAATCCAGTCAGTGGTGGGATGTTTGCCGAAGGACAGATTGGCCGGAAAGAGAAGAGTGCATCAAGGGGTTAACCTTTGGAAGGAAAGATCCCTCAGACATAGTCATGGAGACTTCTGACTGTGAAGATAATAATGATACTGTTGGAAAGGGAGAGGAACCTCATGACCGATGGACCTTGTATCTATCCAAAGCGGAGGTGCAGATGAACTATGGAAGAATACCAACTTGGCAAAATTCCAAGATTCATTTCTTCGCTATGAGTCCTGTGCCGGCACCTGACAGGCAGAAATCTTCTGATGAGGATGTCAGTGGAGAAATTGAGATTGAGAAGGTCCCCCATCTTGATATTGAAATTAAGCGGAAAGATTTGTTGCCTGTTTTTGAGCACTTCCGTAAGCTGAAGCCTGATTGGAGCAACAGTGATGAAAGATATCCATCTTCAGCATCTGAAGCTCATCTGGCGGAAGAGAGGTGCATGTCTGATAGTGCTATGCGCCCTCAACCTGTTCAGAACTCCCGGTTTGGATCTTCTTCTCCAGATGGCGAAATGGATATGATTAAGACTTATCTGGGATTCCCTCAAGGTTCCAATATTAAGAGCGGCATAAAAGTTTCTTCTACTTTTTCTTCAACTCTACTGACTCGGAACTTACTGAAAACTGACAAATCCGTGATGGAGATCTCTCCACCAGAGACCAGTTGTATTGTAAATAGTCCATCCTCTTTAAATAATGTCTCGCTTGTGGCTGAAAGAGCTACTTCGAAGGAAGTCCAATCATCAAACAGTGTTGGAACAAGTGAGGCTTCAAATGTTAGTTCTAACCGTTCTGATTTTAGTATGAACGTTGTTGATGAGGGCTCTGTTCAAGACCAGTTAGATTTTGGGGGTTATTTTCAAGAGGAATATTGTAAAGCTGCACCTCTTGATGGAACCCATGAGATGTCGGAAGTTGTTACTGATGTAGATAGCAGCAGCAGCCCCTGTGACAAAGAGAAGTCGGAGGAAGATGGAGAGAATGATGATATGCTTGGAGGTGTTTTTGCTTTCTCTGAAGAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61363.p1 GENE.R_Transcript_61363~~R_Transcript_61363.p1 ORF type:complete len:982 (+),score=190.18,BCAS3|PF12490.4|6.3e-71 R_Transcript_61363:295-3240(+)
MKQHQTKTNNNNNSNKTNGFTRNSFKFISSCIKTVSSGVRSASASVAASISSDSNDIKDQVLWACFDRIELSPSSFKRVLLLGYTNGFQVLDVDNASTVSELVSRRDDPCTFLQIQPFPAKSEGVEGFRASHPLLLVAAGDETNGPDPTQRRRDGSVRDGFVDSHTGNAVSSPTAVRFYSLRSHNYVHVLRFRSAVYTVRCSPHIVAVGLASQIYCFDSVTLENKFSVLTYPVPQMVGQGTVGINIGYGPMDVGPRWLAYASNNPLSNTGRLSPQSLTPSPGVSPSTSPSSGSLVARYAMESSKQLAAGLINLGDMGYKTFSKYCQELLPDGSSSPVTSSSGWKVTKTSGSSPEMETAGMVIVKDFVSRAVITHFRAHTSPISALCFDPSGTLLVTASIHGNNINIFRIMPSCSQNCSGNQGYTWTASHAHLYKLHRGITSAVIQDICFSQYSQWVAIVSSKGTCHIYVLSPFGGECGLQVQTTHADGPTLVPFLSSPWWSTSSYTVNQQSFSAPPPPVTLSVISRIRTGNSGWLNTVSNAASSAAGMVSSPSCAVSAVFHCSMPNVLQPGRSKTNTLEHLLVYSPSGHLIQYELLPSIGAEASDVASRNTSGSLMQVQDEDLRVKAESSQWWDVCRRTDWPEREECIKGLTFGRKDPSDIVMETSDCEDNNDTVGKGEEPHDRWTLYLSKAEVQMNYGRIPTWQNSKIHFFAMSPVPAPDRQKSSDEDVSGEIEIEKVPHLDIEIKRKDLLPVFEHFRKLKPDWSNSDERYPSSASEAHLAEERCMSDSAMRPQPVQNSRFGSSSPDGEMDMIKTYLGFPQGSNIKSGIKVSSTFSSTLLTRNLLKTDKSVMEISPPETSCIVNSPSSLNNVSLVAERATSKEVQSSNSVGTSEASNVSSNRSDFSMNVVDEGSVQDQLDFGGYFQEEYCKAAPLDGTHEMSEVVTDVDSSSSPCDKEKSEEDGENDDMLGGVFAFSEEG*

Click here to download the sequence:
Link to NCBI Protein BLAST