Transcript Information: R_Transcript_61377.p1


Annotated TAIR IDAT4G37170.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17498580-17500655 | Reverse length=691
E-Value8.7E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1848413251309
Replicate 20.92089036913588
Replicate 30.68318340199051
Condition 2: 8 Hour
Replicate 11.2028144184612
Replicate 20.90228119710047
Replicate 32.2928350257331
Condition 3: 24 Hour
Replicate 11.7319047557742
Replicate 20.92864247960325
Replicate 32.1503709867829


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61377.p1 GENE.R_Transcript_61377~~R_Transcript_61377.p1 ORF type:5prime_partial len:570 (+),score=121.91,PPR|PF01535.16|0.0044,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|0.00073,PPR|PF01535.16|0.026,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.018,PPR|PF01535.16|4e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|0.057,PPR|PF01535.16|0.0015,PPR|PF01535.16|1.2e+04,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|7.7e-08,PPR_2|PF13041.2|0.0051,PPR_2|PF13041.2|78,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|9.4e+02,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|7e-05,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|66,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|0.0032,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|7.1,PPR_1|PF12854.3|0.0056,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|57,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|4,DYW_deaminase|PF14432.2|2.4e-40,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|2.2e+03,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|62,TPR_14|PF13428.2|23,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|4.3e+02,TPR_10|PF13374.2|6.8e+02,TPR_10|PF13374.2|45,TPR_10|PF13374.2|2.9e+03,TPR_10|PF13374.2|5.2e+02,TPR_10|PF13374.2|7.8,TPR_10|PF13374.2|0.97,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|5e+02,TPR_19|PF14559.2|2.6e+02,TPR_19|PF14559.2|26,TPR_19|PF14559.2|4.9,TPR_7|PF13176.2|1.4e+03,TPR_7|PF13176.2|49,TPR_7|PF13176.2|1.4e+02,TPR_7|PF13176.2|18,TPR_7|PF13176.2|1.9,TPR_12|PF13424.2|9.2e+03,TPR_12|PF13424.2|2.4e+02,TPR_12|PF13424.2|3.8e+02,TPR_12|PF13424.2|1.5e+02,TPR_12|PF13424.2|6.1,TPR_12|PF13424.2|2.6,TPR_2|PF07719.13|5.9e+03,TPR_2|PF07719.13|7e+02,TPR_2|PF07719.13|96,TPR_2|PF07719.13|2.3e+03,TPR_2|PF07719.13|8.4e+02,TPR_2|PF07719.13|76,TPR_2|PF07719.13|1e+02,TPR_2|PF07719.13|34,TPR_16|PF13432.2|1.1e+04,TPR_16|PF13432.2|2.5e+03,TPR_16|PF13432.2|81,TPR_16|PF13432.2|25,TPR_16|PF13432.2|3.1 R_Transcript_61377:2-1711(+)
TCCAATCGTATTATTGATATGTATGTGAGTTGTGGGAGTTTGGATGATGCCCGGAAGGTGTTTGATGAAATGCCTCAAACGGATTTGTGTTCTTGGAATACCATGATTAAAGGTTATGCTAAAGTGGGCAAGGTGGAGCTTGCCCGTAAGCTGTTTGATGAAATGCCTGAGAGAGATGGATTTTCGTGGACTGCAATGGTTTCTTGTTACGTCCAATGGGATAGGCCTAAGCAGGGTCTTGATTTGTTTAGGGCAATGCAGAGTGTTGGGCAGTTGAATTGTAATAAGTTCACTGTTTCTAGTGCTATTCCGGCTTCGGCTGCGATCCCGAGTTTGCTTTCTGGGAAGGAGATTCATGGACATATAGTGAGGTCAGGTTTGGATTCTGATTCTGCTGTTTGGAGTGCACTGTCTGATATGTATGCAAAGTGTGGGAGCATTCACGAAGCGAGGAGTATATTTGATAAAACTGTGGACAAAGATGTGGTTTCTTGGACTGCCATGATTGATAGATACTTTGAGGATGGGAGGTGGCAAGAGGGATTTGCATTGTTTTTGGAAATGGTCAAGTCTCGCATCAGGCTGAATGAATTCACATTTGCAGGGGTTTTGAAAGCCTGTGCGGATCAGGTTGTTGAGAATGTTGGGAAACAGGTTCATGGGCAAATGATCAGGGCTGGGGTCAATTTGGATTCATTTGCTTCAAGTGCACTGGTTCATATGTACTCCAAGTGTGGTAATGTCAAGAGTGCAAGAAAGGTTTTTGAAGCGATGCCTAGACCGGATGTTGTATCGTGGACCTCACTGATTGTCGGGTTTGCACAGAATGGCCAGGCTGAGGAAGCTTTGGAGCTCTTTGAGCTGTTGCTCCACTCAGTTACTCGGCCAGATCATGTCACTTTTGTTGGAGTTCTTTCTGCTTGTACTCATGCTGGAATGGTCGATAAAGGGATTGAATATTTTCACTCAATTAAGGATCGACATGGTCTGACACCAACAGCAGAGCACTATGCTTGCCTGGTTGATCTACTGAGTCGAGCTGGCCGTTTTAGTGAAGCTGAAAAGTATATTAGACAAATGCCTATGAAGCCAGACAGATTTTTGTGGGCCTCTTTACTTGGTGGCTGTAGAATTTATAAAAATGTTGAACTAGCAGAACGAGCAGCAAAAGAATTGTTTGAAATAGAGCAGGAGAATGCTGCCACATATACTACTTTGGCTAATATTTATGCCACTGCGGGGAGGTGGGAGGAAGTGGCAAAAGTTAGGAAGATGATGGATGATAGAGGAGTGGTGAAGAAACCAGGCTTGAGTTGGATTGAGATCAAGAGACAGGCCCACAGGTTTGTCGTGGGTGATACATCTCATCCCAATTACAATGAAATACATGAATTCCTGGCGGAGATTTCAAAGAAGATGAAGGAAGAAGGGTACGTTCCTGACACCAATTTTGTACTGCATGATGTGGAAGAGGAGCAAAAAGAGCAGAATCTCTTCTACCACAGTGAGAAGCTTGCAGTGGCATTTGGAATCATTTCTACGCCAACTGGGACATCTATCAAGGTCTATAAGAATTTAAGAACTTGTGTAGACTGCCATACTGCAATCAAATTTATCTCCATGATTACTCAAAGAAAAATAACTGTGCGCGATTCAAATAGGTTCCATTATTTTGAGGGCGGAAGATGTTCTTGTAATGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61377.p1 GENE.R_Transcript_61377~~R_Transcript_61377.p1 ORF type:5prime_partial len:570 (+),score=121.91,PPR|PF01535.16|0.0044,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|0.00073,PPR|PF01535.16|0.026,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.018,PPR|PF01535.16|4e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|0.057,PPR|PF01535.16|0.0015,PPR|PF01535.16|1.2e+04,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|7.7e-08,PPR_2|PF13041.2|0.0051,PPR_2|PF13041.2|78,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|9.4e+02,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|7e-05,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|66,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|0.0032,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|7.1,PPR_1|PF12854.3|0.0056,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|57,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|4,DYW_deaminase|PF14432.2|2.4e-40,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|2.2e+03,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|62,TPR_14|PF13428.2|23,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|4.3e+02,TPR_10|PF13374.2|6.8e+02,TPR_10|PF13374.2|45,TPR_10|PF13374.2|2.9e+03,TPR_10|PF13374.2|5.2e+02,TPR_10|PF13374.2|7.8,TPR_10|PF13374.2|0.97,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|5e+02,TPR_19|PF14559.2|2.6e+02,TPR_19|PF14559.2|26,TPR_19|PF14559.2|4.9,TPR_7|PF13176.2|1.4e+03,TPR_7|PF13176.2|49,TPR_7|PF13176.2|1.4e+02,TPR_7|PF13176.2|18,TPR_7|PF13176.2|1.9,TPR_12|PF13424.2|9.2e+03,TPR_12|PF13424.2|2.4e+02,TPR_12|PF13424.2|3.8e+02,TPR_12|PF13424.2|1.5e+02,TPR_12|PF13424.2|6.1,TPR_12|PF13424.2|2.6,TPR_2|PF07719.13|5.9e+03,TPR_2|PF07719.13|7e+02,TPR_2|PF07719.13|96,TPR_2|PF07719.13|2.3e+03,TPR_2|PF07719.13|8.4e+02,TPR_2|PF07719.13|76,TPR_2|PF07719.13|1e+02,TPR_2|PF07719.13|34,TPR_16|PF13432.2|1.1e+04,TPR_16|PF13432.2|2.5e+03,TPR_16|PF13432.2|81,TPR_16|PF13432.2|25,TPR_16|PF13432.2|3.1 R_Transcript_61377:2-1711(+)
SNRIIDMYVSCGSLDDARKVFDEMPQTDLCSWNTMIKGYAKVGKVELARKLFDEMPERDGFSWTAMVSCYVQWDRPKQGLDLFRAMQSVGQLNCNKFTVSSAIPASAAIPSLLSGKEIHGHIVRSGLDSDSAVWSALSDMYAKCGSIHEARSIFDKTVDKDVVSWTAMIDRYFEDGRWQEGFALFLEMVKSRIRLNEFTFAGVLKACADQVVENVGKQVHGQMIRAGVNLDSFASSALVHMYSKCGNVKSARKVFEAMPRPDVVSWTSLIVGFAQNGQAEEALELFELLLHSVTRPDHVTFVGVLSACTHAGMVDKGIEYFHSIKDRHGLTPTAEHYACLVDLLSRAGRFSEAEKYIRQMPMKPDRFLWASLLGGCRIYKNVELAERAAKELFEIEQENAATYTTLANIYATAGRWEEVAKVRKMMDDRGVVKKPGLSWIEIKRQAHRFVVGDTSHPNYNEIHEFLAEISKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPTGTSIKVYKNLRTCVDCHTAIKFISMITQRKITVRDSNRFHYFEGGRCSCNDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST