Transcript Information: R_Transcript_61520.p1


Annotated TAIR IDAT5G66560.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26564368-26566662 | Forward length=668
E-Value6.8E-263
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.170238660144
Replicate 211.509083191156
Replicate 312.929580776495
Condition 2: 8 Hour
Replicate 19.6855199124659
Replicate 211.528276860345
Replicate 310.030445572451
Condition 3: 24 Hour
Replicate 114.829042890784
Replicate 210.847919928403
Replicate 313.878426082951


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61520.p1 GENE.R_Transcript_61520~~R_Transcript_61520.p1 ORF type:complete len:675 (+),score=89.96,NPH3|PF03000.10|8.9e-86 R_Transcript_61520:389-2413(+)
ATGGGAGGAGACAAGTCCAGTACAACAGCTTCCAAAGGCCAAGCATGGTTTTGCACCACCGGCTTACCAAGTGATGTCGTTGTTGAAGTTGACGACATGACTTTCCATCTCCATAAGTTTCCTTTGATGGCCAAGAGCAAGAAGCTCCACGACCTGATAACGGAGCAAGAAACTGAACAAACTCCAAAACCACCACCGCCACCATTGTCCTCAATTAAAGGTAAAGAGAAACAACAAGAGGAGAGAGAAACTGACCTGGAGGATGACGACGACGATGACGACCCTGTGGTCCAGACTCGAAACGAACCACAAGACGACGACGAAGATGAAGTCCTGGAGCAGGACCAATGCCACGTGTACCTCCCCTCATTCCCAGGCGGCTCAGAGACATTCGAGACCGCCGCTAAATTCTGTTACGGCGTCAAGATCGAGCTCACCTCCGCCAAAGTCGCTCCACTCCGGTGCGCCGGCGAAGTTCTAGAGATGACTGAAGAATACTCGGAAGAAAACCTCATTTCCAAAACTGAGAGATATTTCACTCAGTCTGTACTCAAAAACATCAAGGACTCCATCAAAGCCTTGAAATCTTGCGAGAGGTTGTGTCCTTTAGCTGAAACCCTAGCTATCATTCCGAGATGCATTGATGCCATTTCGTCTAAAGCTGCTCTCTACGATCCGACATTGTTCGGATGGCCGGTGAACGAAGCTGCTTCATCTGCTGGTGATTCCAGGAAGAAGAATGCCAAGTTGAGAGATCCTTGGGTGGAGGACATAGCTCAGCTTAGCCCTGACTTCTTCAATCGAGTCATTTCCGCCATGAGAGAGAAAGAGCTCAATCAGGAGATTATCGAGAGCTGTCTCATTCACTACGCCAAACGCTGTTTTCCAGGAATCACTCGTTCAAATCGTAAGCCACCGTCATCTTCAATTGCTTCAGAAGCGGAGCAAAGAGAGCTATTAGAGAAGATAGTCTCGAATCTTCCACCGGAAAAGAGCTCTCGATCACCGGCGGCCACGAGGTTTCTATTTGGCCTTCTTCGAACCGCGAATATTCTCAGCGCTTCTGAAGCCTGTAAATCTGCTCTAGAGAGAAAAATCGGAGCTCAGCTAGAGCAAGCTACTCTAGACGATCTCCTGATTCCGAGTTACTCATATCTGACCGAGACGCTATATGACGTTGATTGTATTCAGAGGATTCTAGGTCATTTTCTGGATAGATACGAGGAAAGAGAAATCGAAGTTGCCGGAGGTGATCAGAGCATTGCTAGTGTCAGATCTCCGGCGATTATGCTTGTTGGAAAACTCATCGACGGTTACTTATCGGAGATTGCGTCTGATGCGAATTTAAAGCCTGATAAATTCTACGAACTTGCAATGTCTCTTCCTGAACAAGCCAGATTATACGACGATGGCGTCTACAGAGCTGTTGATGTCTATCTCAAGGCACATCCTTGGATAACGGAGTTTGAGAGAGAGAAAGTAAGCGGAGTAATGGACTGTCAAAAGCTCACACTAGAAGCGTGCACACACGCGGCTCAAAACGAGCGTCTACCACTAAGAGCAGTAGTTCAAGTACTCTTCTTCGAGCAGGTGCAGCTCCGCCACGCTATCGCCGGAACACTGATGTCCGGCGACGCCGTTACGGTGGATTCCGGGGAGCCCTCAGGACATGGTAGCGGCGAGGAGGAGGAAGAAGAAAACGGAGGGGTAGTGACTCGGGCGGCGCACGAGGGGCAAGAAAAGAACAGCACGTGGAGAGAGGCAATAAGAGAGAATCAGGTGCTACGCTTGGATATGGATAGCATGAGGACGCGAGTGCATGAGCTGGAGAGAGAGTGCTCCACTATGAAGAAGGTGATCGAGAAGATTGATAAGATGGGGTCCCCACAACACAATGCCAAAAGTTGGAGGAGCTCGCTTACTCGCAAGTTTGGCTGTAAGTTCAAGACTCAGGTGTGTGATTCTCATGAATCAACGGTTGTGGAAGCACGGAAAGGCAGGCATCATCACACCCATCAGCGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61520.p1 GENE.R_Transcript_61520~~R_Transcript_61520.p1 ORF type:complete len:675 (+),score=89.96,NPH3|PF03000.10|8.9e-86 R_Transcript_61520:389-2413(+)
MGGDKSSTTASKGQAWFCTTGLPSDVVVEVDDMTFHLHKFPLMAKSKKLHDLITEQETEQTPKPPPPPLSSIKGKEKQQEERETDLEDDDDDDDPVVQTRNEPQDDDEDEVLEQDQCHVYLPSFPGGSETFETAAKFCYGVKIELTSAKVAPLRCAGEVLEMTEEYSEENLISKTERYFTQSVLKNIKDSIKALKSCERLCPLAETLAIIPRCIDAISSKAALYDPTLFGWPVNEAASSAGDSRKKNAKLRDPWVEDIAQLSPDFFNRVISAMREKELNQEIIESCLIHYAKRCFPGITRSNRKPPSSSIASEAEQRELLEKIVSNLPPEKSSRSPAATRFLFGLLRTANILSASEACKSALERKIGAQLEQATLDDLLIPSYSYLTETLYDVDCIQRILGHFLDRYEEREIEVAGGDQSIASVRSPAIMLVGKLIDGYLSEIASDANLKPDKFYELAMSLPEQARLYDDGVYRAVDVYLKAHPWITEFEREKVSGVMDCQKLTLEACTHAAQNERLPLRAVVQVLFFEQVQLRHAIAGTLMSGDAVTVDSGEPSGHGSGEEEEEENGGVVTRAAHEGQEKNSTWREAIRENQVLRLDMDSMRTRVHELERECSTMKKVIEKIDKMGSPQHNAKSWRSSLTRKFGCKFKTQVCDSHESTVVEARKGRHHHTHQR*

Click here to download the sequence:
Link to NCBI Protein BLAST