Transcript Information: R_Transcript_61563.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value8E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5155888157348
Replicate 20.68219026623351
Replicate 30.99234964315462
Condition 2: 8 Hour
Replicate 11.3259493653743
Replicate 21.3117845845461
Replicate 31.5399380851231
Condition 3: 24 Hour
Replicate 11.8026437083125
Replicate 20.89574607407579
Replicate 31.8766533801943


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61563.p1 GENE.R_Transcript_61563~~R_Transcript_61563.p1 ORF type:complete len:1108 (+),score=210.70,RVT_1|PF00078.23|9.4e-43,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|6.2e-17,RVT_3|PF13456.2|5e-09 R_Transcript_61563:250-3573(+)
ATGTGGATTAGGGATGACTCTATTCAAGATGCCTGGAGAAAGGGGTTCCTTGGGTCAAATGGTTTTAGATTAAAGCAGAAGTTGAAAGGGGTGAAAAGTGCACTCAAAATTTGGAATAAGGAACACTTTGGAGATGTTCAAAAGAAAATCAGAGAACTCAATGAGAAGATAAATGAGATCCAAAGTGACACACAAGGTCTCTATAATGTTGGGGAAGAAGACAAACTGATTGCTGAATTAACAGAAGTATACACTCGGGAGGCAGTTATGTTTAAGCAGAAGGCTAGGGTTAAATATCTGAAAGAAGGGGATCTAAATACCAGATTCTTTCACCTTTCCACCATAAATAGGAGGAGAAGGAACTCAATTCAGGCTATAAAGAGAGAGGATGGAAGATGGGAGGAGGACCCTATAGAGATTGGAATGGTGTTTGCAGACTATTTCCAGAACCTCTTTTCTACCTCACATCCAGAGGAGGCTGAGCTTTCAGAGCTCTATGGGGTGGCTGTTTCTGAGCAGGATAATGCTGGATTATGTGAGATACCTTTAGAGGAGGAGATTCTAGCAACAATCAGCTCGATGGGGCCTACCAAATCACCTGCCCCAGATGGTTTTCCTGCGTTATTTTATCAGAAATTCTGGGGAATTATCAAGCATGATGTGGTGAGCATGGTCCAGTCCTTCTTTATAAATGGTTTTTTGTTGAAAGAATTAAATCATACTTTCATCACCCTTATTCCCAAATCTCATAATGCCATTAGAGTCACAGATTTTAGACCTATTTCTCTTTGTAATGTGGTGTATAAGGTTGTGTCCAAAATCTTGGCAAATAGATTAAAATCCCTGCTTAATGATATTATTTGTCCGTTACAATCTGCGTTTATACATGCGAGGCTGATAACGGATAACTCTATTATGATTAATGAAATTCTCCACACAATGGCTAAGTGTCATTCTAAAGAGGGTCTTATGGCAGTGAAGGTGGATATGGCAAAGGCCTATGATAAGCTAGAGTGGGGTTTCTTGGTCAATGTTTTGAAAGCTATAGGTTTCAATGAGAGGTTTATTCATTTGATTTATCAGTGCATATCTACTGCTACTTACTCCATTTTGATCAATGGAAGACCGCATGGTTTTTATAAACCAGAAAGAGGATTGAGACAAGGAGATTCTCTATCTCCTTTCTTATTTGTGTTGGCTATGGATGCTTTTTCTAGATTGGTGCAGAGGAAACAAAGTGATGGGAAAATTAAAGGGGTTGAAATCAGCAGGGATTGTCCTCCAATCTCTCATTTGTTGTATGCAGATGACCTTGTATTGTTTGCTAGAGCAAATGAGAAGAATGCGGTGGAAATCAAGGATGCTCTTGACACCCTTGAGAGTTGGAGTGGATTAGCTGCAAATAAGGGCAAATCAGGGCTATTTTTCAGCAAGCAGACTAAGAGAGGGAATATAGCCAAAGTAAATGCCATCCTACCCTTTAGAGAGATAGATAAAGAAGCCGTTTATCTGGGGTTACCTTTCTTTAGAAAGAATTGCAAATCTAAGAGGCTCAAATTCATTAAGGAGAGGTTACAATCTAAGCTTCAAGGGTGGAAAGCTAAGAGCATGTCATATGCTGCAAGGACTACTCTAATTCAATCTGTAGCATCAGCAGTCTCGGTGTATGCTATGACTAGCAATTTGCTACCTAAGAAGCTTTGTAGTGAGATGGATGCCCTCATGAGAGACTTCTGGTGGGGTTTTGGGGAAGAGAAAAAAGGCATTTATCTTAGGGCTTGGAGGAATATTTGTAGACCTAAAGGAGAAGGCGGACTTAATATTAGAATGATGGCTGACTATAATAAAGCCTTACAAGCCAAGCTGTTTTGGCAGCTAGTGACTGGAGAAGATAAGTTGTGGGTAAATCAATGTTTGAAAAAATATTGTAGACGACATGATCCTATGTTTGTACAAGCAGACAAGGGGGATTCTTCTCAATGGAAGGAAATACTTCAAGGAAAAGAGGTAGTGGAGAAGGGTTATTGCAGATTTGTTGGCAATGGGAGGGGGATTAATATTTGGACTGAACCTTGGGTGCCATACCTAGAGGGATTCAAACCTGAAGCTAGAGAGGACGCGGAGGTGAATGCTTTTGAAGTACAAGATCTTATTGAAGGAAATTCCTGGAAGAAGGAGTTAGTTTTACAGCTATTTAAACCTCCCTCAGCAGAGGCTATTTTCAGAATTGAACTGCCTATGGACAATGTGGTAGACTCAGTAGTATGGACTAAAGAGAAGCATGGGTGTTTCACTGTGAAAAGTGCATATAGGGAAGTGATGAAGGAAAAATCCCTCCAATCTTCCGAGGTGGAAGCTTATTGGTGGAAAAAATTTTGGAAACTGAAGGTGCCTTATAGAGTCAGAATGTTAGTTTGGAGAATTCTAACTGACTCTATCCCTCTCAAAGCGGTCCTAAAAGAGAGGATTCAGGAGGTGGAGGATAGCTGCCGTTTGTGTGGTCAAGGTAGGGAGGACTTTATTCACCTGTTTACTGAGTGTCACTATTCGAAGTTGGTGTGGTTTCAGTGCCTTGGAATTAGAACTGATGCCATAGGGAAATTGAGCAGGGTGGATTGGATCAAAGCTTGCCTTAATCCTGAGAATTTTCTCAGCATCCCTAGAGAGATGGCTCAGGAGTTCTCTGACAAATCGGCTATCCTCTTGGATTGTATTTGGAGAGAGAGGAATCTTTGCATACATGAAGGCAAACAACCTGATCCCCAGTCAGTTTGCCAACAGTTTGATAGGCTGTGGAAGGAGGTATCTCAGTTAGATGTAAAGGTGGAGATAGAGAGGGGCAAGGAGTTTAACCCCTTCAAATTACCAGAAGGGGAGGTGTTTTGTGTGGATGCGACTGTTAGACAGCAGCAGGCCTGGTGTGCATGGGTCTTACTGGAAAATCAAACTAATGTGTTGGATGTTGGGGCTGGGATAATTAATGTGGATAACGTGGCTAGGGCGGAAGCAGAAGCTATCTTGTTGGCGCTTCATTTTTGTATGGAACAGGGTATACAGGGTTGTTCAATTTATAGTGATGCGAACACCGTTATTGATCAGGCGGCTAAAGGCCCTCCTTACTCTTGGGAAGTTAGGTATGTAATGGGAGAGATTGCTAAATTATGTACTGAGTTGAATGTTAGGTTGTTTTTCATTCCTAGGTTTCACAATTGGGCTGCTCATAACATGGCTTCATGGGCCTGTCATAGGCAGTTTCAAGGTGTTTTAGAAGGGGATAATATCCCTGAGGCTGTTAGATGTAATCTTGTAACTCCTATTGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61563.p1 GENE.R_Transcript_61563~~R_Transcript_61563.p1 ORF type:complete len:1108 (+),score=210.70,RVT_1|PF00078.23|9.4e-43,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|6.2e-17,RVT_3|PF13456.2|5e-09 R_Transcript_61563:250-3573(+)
MWIRDDSIQDAWRKGFLGSNGFRLKQKLKGVKSALKIWNKEHFGDVQKKIRELNEKINEIQSDTQGLYNVGEEDKLIAELTEVYTREAVMFKQKARVKYLKEGDLNTRFFHLSTINRRRRNSIQAIKREDGRWEEDPIEIGMVFADYFQNLFSTSHPEEAELSELYGVAVSEQDNAGLCEIPLEEEILATISSMGPTKSPAPDGFPALFYQKFWGIIKHDVVSMVQSFFINGFLLKELNHTFITLIPKSHNAIRVTDFRPISLCNVVYKVVSKILANRLKSLLNDIICPLQSAFIHARLITDNSIMINEILHTMAKCHSKEGLMAVKVDMAKAYDKLEWGFLVNVLKAIGFNERFIHLIYQCISTATYSILINGRPHGFYKPERGLRQGDSLSPFLFVLAMDAFSRLVQRKQSDGKIKGVEISRDCPPISHLLYADDLVLFARANEKNAVEIKDALDTLESWSGLAANKGKSGLFFSKQTKRGNIAKVNAILPFREIDKEAVYLGLPFFRKNCKSKRLKFIKERLQSKLQGWKAKSMSYAARTTLIQSVASAVSVYAMTSNLLPKKLCSEMDALMRDFWWGFGEEKKGIYLRAWRNICRPKGEGGLNIRMMADYNKALQAKLFWQLVTGEDKLWVNQCLKKYCRRHDPMFVQADKGDSSQWKEILQGKEVVEKGYCRFVGNGRGINIWTEPWVPYLEGFKPEAREDAEVNAFEVQDLIEGNSWKKELVLQLFKPPSAEAIFRIELPMDNVVDSVVWTKEKHGCFTVKSAYREVMKEKSLQSSEVEAYWWKKFWKLKVPYRVRMLVWRILTDSIPLKAVLKERIQEVEDSCRLCGQGREDFIHLFTECHYSKLVWFQCLGIRTDAIGKLSRVDWIKACLNPENFLSIPREMAQEFSDKSAILLDCIWRERNLCIHEGKQPDPQSVCQQFDRLWKEVSQLDVKVEIERGKEFNPFKLPEGEVFCVDATVRQQQAWCAWVLLENQTNVLDVGAGIINVDNVARAEAEAILLALHFCMEQGIQGCSIYSDANTVIDQAAKGPPYSWEVRYVMGEIAKLCTELNVRLFFIPRFHNWAAHNMASWACHRQFQGVLEGDNIPEAVRCNLVTPIG*

Click here to download the sequence:
Link to NCBI Protein BLAST