Transcript Information: R_Transcript_61566.p1


Annotated TAIR IDAT2G43420.1
Annotated Gene Name3-beta hydroxysteroid dehydrogenase/isomerase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18031493-18034936 | Reverse length=561
E-Value8.1E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8883161560487
Replicate 28.6918245334931
Replicate 39.7558507649712
Condition 2: 8 Hour
Replicate 18.5512816255286
Replicate 210.247150281565
Replicate 313.667822647719
Condition 3: 24 Hour
Replicate 110.051373862896
Replicate 29.6937935157904
Replicate 39.6574369913227


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61566.p1 GENE.R_Transcript_61566~~R_Transcript_61566.p1 ORF type:complete len:587 (+),score=78.31,3Beta_HSD|PF01073.15|3.4e-68,Reticulon|PF02453.13|6.7e-32,Epimerase|PF01370.17|1.3e-22,RmlD_sub_bind|PF04321.13|4.2e-07,GDP_Man_Dehyd|PF16363.1|2.5e-06 R_Transcript_61566:319-2079(+)
ATGGAAGATCACATCAATCAGTACCAGAACCCTAACCCTAACCCTAACACAACCACTTGCGTAGTGATCGGAGGTCAGAGCTTCATTGGCCGATTCCTCGTTCTGCGGCTCTTGCAACTCGGTAATTGGATCGTCCGAATCGCCGATTCTTCTCCCAGTCTTCACGCCGAGCAACAATCTCCTCTTTTTGACGCTGTTTCTGATGGCCGTGCCTCTCATTTCCTCCTCGATCTTCGCGACAAGTCTCAGCTCCTCAAAGCGATTGATGGGTCATCAACTGTCTTCTATGTGGAAACCACTGACGCATCTATGTGTGATCTATATGAAAGTTATATGCTCATCGTTCAAGGTGCGAAAAATGTCATCAATGCTTGCCGGGAGTGTAAAGTGAAACAACTAGTATACAACAGCTCTGCGGATGTTGTTTTTGATGGTACACATCATATTCGAAATGCTGATGAATCTATGCGCTACCCGTGGGAATATGTAGACATGTTCACAGAGATGAAAGCTCAAGCAGAGTCACTGATCTTGTCTGCTAATGACTATGACGGTCTCTTAACATGTGCAATTCGTCCTAGCCATGTGTTTGGACCAGGAGATACAAATTTTGTGCACATTCTGGTGAATCAAGCCAATTCCCTATGGGCAAAGTTTCTTTTAGGGAGCCGTGATATTCTGACTGACTTCACCTATGTTGAGAATGTGGCCCATGCACACATCTGTGCTGCTGAAGCTCTTGTTTCTCAGACTGTTTCTGTGTCTGGAAAGGCATTTTTCATCACAAATCTTGAAAGAAGGAACTACTGGGACTTTATTTCCAGATTATATGAAGGCCTGGGATACGAAAGGCCTCATATTAAGCTTCCTCACAAGCTGGTCAGCTTCGTACTTCCATTGGTGAGGTGGGCACGTTACAAGTTGGGATCTGAAACTGAAGTTGGTGAAGTATTGGTCTTTGCTCAATTTGTTTTTGAATCATCATTATTTAACAGAACTTTCAACTGTTCTGCTGCTAAAGAACATATCAAATACACGCCTATTGTCTCAATGGAAGAAGGTATTGCTTTGACTGTCAAGTCCTTATCCCATTTGGCTAAAGGCTCATTGCCTTCTAAAGAGACTCACTTTCGTGAGTTATCAAAAGCAGAAGAGATTTTGGGCTATGGGAAAGTTGCTGACATACTGCTGTGGAGAGATGAGATGGAAACATTCACATGTTTTCTTGTTACGGTTGGATTATTTTACTGGTTTTTTCTGAGTGGACGGACATTCATCTCATCCACTGCTGGGCTTCTGCTGCTCGCCACATTTTTCCTCATTGTAAATAGCCTTCTTCCATTCAACATCTTCCAGAAGATCCCCTTGCCGCGTCCTGAAATCCCAGAGTCAAAAATGAGAAGTCTAATTGAATACATAGCATGTGCTTGGAATGAAGGGGTTAGTATAGCGAAATCAGTGGCAGAAGGAGAGGGTTGGTGTTTGTTCCTGAAGACTGCAATTCCTTTATATTTTCTCAAGTTGATCATTTCACGCTCATTTGCGCTGTTGGTTGGATCAGTGTTGGTCTTTGCGTTTACATCTTTCTTTATCTACGAGCAATACGAAGACGAACTTGATCGTTTTTTTTGGGTGTTTACAATTGTTTCAAAGAGTTTATTGACATTGTTGCTAAGAAGCCTTCCCTCCTCTGTTACATCATTTTTCTCCGATGATGATGAGACTTGTGAAGAGCAAGACCTGCCTACCATGAACGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61566.p1 GENE.R_Transcript_61566~~R_Transcript_61566.p1 ORF type:complete len:587 (+),score=78.31,3Beta_HSD|PF01073.15|3.4e-68,Reticulon|PF02453.13|6.7e-32,Epimerase|PF01370.17|1.3e-22,RmlD_sub_bind|PF04321.13|4.2e-07,GDP_Man_Dehyd|PF16363.1|2.5e-06 R_Transcript_61566:319-2079(+)
MEDHINQYQNPNPNPNTTTCVVIGGQSFIGRFLVLRLLQLGNWIVRIADSSPSLHAEQQSPLFDAVSDGRASHFLLDLRDKSQLLKAIDGSSTVFYVETTDASMCDLYESYMLIVQGAKNVINACRECKVKQLVYNSSADVVFDGTHHIRNADESMRYPWEYVDMFTEMKAQAESLILSANDYDGLLTCAIRPSHVFGPGDTNFVHILVNQANSLWAKFLLGSRDILTDFTYVENVAHAHICAAEALVSQTVSVSGKAFFITNLERRNYWDFISRLYEGLGYERPHIKLPHKLVSFVLPLVRWARYKLGSETEVGEVLVFAQFVFESSLFNRTFNCSAAKEHIKYTPIVSMEEGIALTVKSLSHLAKGSLPSKETHFRELSKAEEILGYGKVADILLWRDEMETFTCFLVTVGLFYWFFLSGRTFISSTAGLLLLATFFLIVNSLLPFNIFQKIPLPRPEIPESKMRSLIEYIACAWNEGVSIAKSVAEGEGWCLFLKTAIPLYFLKLIISRSFALLVGSVLVFAFTSFFIYEQYEDELDRFFWVFTIVSKSLLTLLLRSLPSSVTSFFSDDDETCEEQDLPTMNE*

Click here to download the sequence:
Link to NCBI Protein BLAST