Transcript Information: R_Transcript_61577.p1


Annotated TAIR IDAT2G43410.2
Annotated Gene NameRNA binding
Annotated Gene Symbol(s)FPA
Annotation TypeOrtholog
Chromosome Positionchr2:18026397-18030989 | Reverse length=901
E-Value4E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4057359482152
Replicate 23.6580666596414
Replicate 35.0569766769549
Condition 2: 8 Hour
Replicate 13.3017932446763
Replicate 24.4561661903079
Replicate 37.0613664227281
Condition 3: 24 Hour
Replicate 18.4653489658241
Replicate 26.1849473022502
Replicate 39.4289515417302


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61577.p1 GENE.R_Transcript_61577~~R_Transcript_61577.p1 ORF type:3prime_partial len:838 (+),score=191.66,RRM_1|PF00076.18|2.5e-13,RRM_1|PF00076.18|9.9e-13,RRM_1|PF00076.18|2.4e-08,RRM_6|PF14259.2|3.2e-09,RRM_6|PF14259.2|1.2e-09,RRM_6|PF14259.2|3.3e-05,RRM_5|PF13893.2|0.00039,RRM_5|PF13893.2|4.5e-09,RRM_5|PF13893.2|5.6e-10,RRM_occluded|PF16842.1|0.97,RRM_occluded|PF16842.1|0.018,RRM_occluded|PF16842.1|0.99,SPOC|PF07744.9|2e-07,SPOC|PF07744.9|9.8e+03 R_Transcript_61577:148-2658(+)
ATGAAGCCAAAGAGACCAGGAGGCTACGGAGGTCGAGGCTCGAGCGATTCCGACACTCCGTCAAGCAATCTATGGGTCGGAAACTTACCACTCGACATAACCGAACCCGAATTGACGGAACTTTTCGAGAAACACGGTTTGATCGATGAGATCACTTGCTACGCTTCTAGAAGCTACGCTTTTGTCTACTACAAATGTGTTGAGGACGCTACTTCTGCTAAAGATTCCCTTCAAGGCTTTTTGATTAGAGGAAATCCCATTAAGATTGAGTTTGCCAAACCGGCTAAGCCCTCAAAGCATGTATGGGTTGGTGGGTTTGGCTCTTCTGTCACCAAGGAACAGCTGGAAGAAGAATTGATTAAATTTGGTAAAATTGAGGAGTTTAAGTTCATCCGAGATCGGAATACTGCACTTGTTGACTTTCTTAGGGTAGAAGATGCTTCTGCAGCAGTGAAGAACTTGAATGGTTTGCAAATTGGTGGTGATCGCATACGTGTTGACTATCTGAGATCTCATCCTGCAAGGAGGGAACAATCTGATTTCCATGAGATGGGAGGTGCACAGTTCAGAGGTATTGGTGGCATGGATCTGTCATGGACAAATCCAGACAACATGAGGAATTTCCCTGAGCCCACTTTTTCAGGACATAAGAGGTCGCAGCCATCTCAATCTATTGGAGGGCGTAAATCTGGTCAGCCAAGTAAAGTTTTGTGGGTCGGATATCCAAATTCGGTGGTAATAGATGAAGAAATGTTGCATAACGCGATGATTCTGTATGGAGAGATTGAGAGAATAAAATGTTTCCCTTCTAGACATTATGCCTTTGTGGATTTTAGAAGTGTGGAAGAAGCCAGGCGGGCTAAGGAGGCCTTGCAAGGGAGACTATTTAATGATCCACGGATTACAATTATGTTTTCCAACAGCGACTTAGCTCCAGGCAAAGATTTTAGTCCAGCATATCCTGGGTACAGGGGACAGGGACCTGATATGTTCAGAAATGAAGTTCCTTTCCGTCCGCCGATGATGGATATATTCCCTTCAAATCAGGGTATGCCCCCAAACAAATTTTCTGGGCCTCCTGCTCCAAGTGGCTTGCTCAGACCTGGACCAAGGCCATTTGGGCCTAGGGGGAGTATGGATCCGCTGCGGTCGGGCCCAGAATATTCTGATTCAATGTCTGACTTGACTAATAATGCTTCTACTGGTTTGAACCGAAGAAAATTATCTCCACCTGCTACAGGATTACTTCCGACCCCTGGTGCCCCTGGTAGGACATCCCATAAAACTAGTGGATGGGATGTTCTCGATCCCAATCAGCTTCCAAGGGAATCTAAGAGGTCGAGAATAGATGGTCCATCTTTATACAACAACCCCCCTCTCATCACAGGAAAGGGGGATGAATATCCTGCTGGTGTGGATCAAGCTTATGGCACCGATCCCCAATTTACTGGTGGACCACCTCCTAAAGTTCATGCTGATAGCGGATTAGGTCCTGCAGATATGGGTGTTCCCAAAGGTTGGGCTGATGAAGATTTTATTTGGCGTGGAGTGATTGCAAAGGGTGGCACTCCTGTCTGCCGTGCTCGGTGCATCCCTATGGGAAAAGGATTAGAGTGTGAGCTGCCTGAAGTTGTCAATTGCTCTGCAAGAACAGGATTAGACATGCTAGCAAAGCACTATGCTGGTGCTATTGGGTTTGACATTGTCTTTTTCTTGCCAGATAGTGAAGATGATTTTGCCAATTATACAGAGTTTCTTCGGTATCTTGGTTCAAAAGACCGTGCTGGTGTGGCTAAGTTGGATGATGGAACGACCTTATTTTTAGTACCTCCATCAGAGTTCCTGACAGATGTTTTGAAGGTGGCTGGACCCGAGCGTTTATATGGAGTAGTGCTTAGGTTGCCACAACAACTCCCTGGTGCAGCTGCTCCTCAGCCGGTACATCAGCCCCTTCCTCCTATGCAACGCATGGAGAGCCAGTTGGCTCCTCCACCACATGAATATGTTGCTCCCACTCCCAAGAGAGAAATGGCCATTCAAATGGACTATGGAAGACCTATGCCTGCTGAGACAACCATGCCTCCTAAAGCGCCTTTTCCTGCCGCAGCTGTTCCACAAAACCAATCTAGTGATAGCAATCCATCCACATCATTACCTGCTGTCACATTGACACCTGAGCTTATTGCCACCCTTGCTTCTTTGATTCCATCAAATGCTCAGGCCCCTCTTGCACAAAGTGCTCAGCCACAATTAAGCTCCTCTGCAGCAATGCCTTCGTTTCCTGTACCATCAACTGAAAAAGGAGCTTTCTTCCAGACTCATCAGCCTCAAGTGGTTGACCAAAGTGGTCAGCTCTCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAATGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTTAGTGGTCAACCATCTCAACAGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61577.p1 GENE.R_Transcript_61577~~R_Transcript_61577.p1 ORF type:3prime_partial len:838 (+),score=191.66,RRM_1|PF00076.18|2.5e-13,RRM_1|PF00076.18|9.9e-13,RRM_1|PF00076.18|2.4e-08,RRM_6|PF14259.2|3.2e-09,RRM_6|PF14259.2|1.2e-09,RRM_6|PF14259.2|3.3e-05,RRM_5|PF13893.2|0.00039,RRM_5|PF13893.2|4.5e-09,RRM_5|PF13893.2|5.6e-10,RRM_occluded|PF16842.1|0.97,RRM_occluded|PF16842.1|0.018,RRM_occluded|PF16842.1|0.99,SPOC|PF07744.9|2e-07,SPOC|PF07744.9|9.8e+03 R_Transcript_61577:148-2658(+)
MKPKRPGGYGGRGSSDSDTPSSNLWVGNLPLDITEPELTELFEKHGLIDEITCYASRSYAFVYYKCVEDATSAKDSLQGFLIRGNPIKIEFAKPAKPSKHVWVGGFGSSVTKEQLEEELIKFGKIEEFKFIRDRNTALVDFLRVEDASAAVKNLNGLQIGGDRIRVDYLRSHPARREQSDFHEMGGAQFRGIGGMDLSWTNPDNMRNFPEPTFSGHKRSQPSQSIGGRKSGQPSKVLWVGYPNSVVIDEEMLHNAMILYGEIERIKCFPSRHYAFVDFRSVEEARRAKEALQGRLFNDPRITIMFSNSDLAPGKDFSPAYPGYRGQGPDMFRNEVPFRPPMMDIFPSNQGMPPNKFSGPPAPSGLLRPGPRPFGPRGSMDPLRSGPEYSDSMSDLTNNASTGLNRRKLSPPATGLLPTPGAPGRTSHKTSGWDVLDPNQLPRESKRSRIDGPSLYNNPPLITGKGDEYPAGVDQAYGTDPQFTGGPPPKVHADSGLGPADMGVPKGWADEDFIWRGVIAKGGTPVCRARCIPMGKGLECELPEVVNCSARTGLDMLAKHYAGAIGFDIVFFLPDSEDDFANYTEFLRYLGSKDRAGVAKLDDGTTLFLVPPSEFLTDVLKVAGPERLYGVVLRLPQQLPGAAAPQPVHQPLPPMQRMESQLAPPPHEYVAPTPKREMAIQMDYGRPMPAETTMPPKAPFPAAAVPQNQSSDSNPSTSLPAVTLTPELIATLASLIPSNAQAPLAQSAQPQLSSSAAMPSFPVPSTEKGAFFQTHQPQVVDQSGQLSQQFSGQPSQQFSGQPSQQFNGQPSQQFSGQPSQQFSGQPSQQFSGQPSQQF

Click here to download the sequence:
Link to NCBI Protein BLAST