Transcript Information: R_Transcript_61604.p1


Annotated TAIR IDAT1G23820.1
Annotated Gene Namespermidine synthase 1
Annotated Gene Symbol(s)SPDS1
Annotation TypeOrtholog
Chromosome Positionchr1:8420278-8422724 | Forward length=378
E-Value9.9E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1197.82683534731
Replicate 2178.76679644217
Replicate 3191.7788514087
Condition 2: 8 Hour
Replicate 1252.8582928501
Replicate 2284.91066777761
Replicate 3329.3589120239
Condition 3: 24 Hour
Replicate 1327.47485821109
Replicate 2305.32749026643
Replicate 3309.59909555699


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61604.p1 GENE.R_Transcript_61604~~R_Transcript_61604.p1 ORF type:complete len:352 (+),score=88.55,Spermine_synth|PF01564.13|7e-98,Spermine_synth|PF01564.13|5e+03 R_Transcript_61604:478-1533(+)
ATGGCTGAAGAAAGTGCTGTCATCTCTGGAACTGATTTGCCTGTCAAGAGGCCTAGAGAAGAAGAAAAACGAGAAAATACTATGAGTGAAAACAACAACAATGTAAATGGGGCCTCAAAAATGGAGACTGATAACAATACCCCAAAAGAAAACCCTGATTCCCTTTCTTCTATCATTCCTGGATGGTTCTCTGAGATTAGCCCTATGTGGCCTGGCGAGGCACATTCACTGAAAGTGGAGAAGATTCTGTTCCAAGGGAAGTCAAAGTACCAGAATGTTATGGTCTTTCAGTCCGCGACATATGGGAAAGTTCTTGTTTTAGATGGGGTGATTCAGCTGACTGAGAGGGATGAGTGTGCATACCAAGAGATGATCACTCACCTCCCACTTTGCTCTATTCCAAACCCAAAAAAGGTTCTGGTTATTGGAGGAGGAGATGGAGGAGTCCTCCGTGAAGTGGCTCGTCATTCATCAGTGGAGCACATAGATATCTGTGAAATTGATGAGATGGTAGTAACGGTTTCTAAGGAATTTTTCCCTGACGTGGCTGTTGGATATGATGATCCTCGAGTAAATTTGCATATTGGTGATGGAGTTGCATTTTTGAAGGCAGCTCCAGAGGGAAGTTATGATGCAGTCATTGTTGATTCATCTGATCCCATAGGCCCAGCACAAGAACTTTTCGAGAAGCCCTTCTTCGAGTCAGTCGCAAAGGCTCTTCGACCTGGAGGAGTTGTGTGCACTCAGGCTGAAAGTATATGGCTTCACATGCATATTATTGAAGATATTGTTGCAAACTGCCGTCAAATTTTCAAGGGTTCTGTCAACTATGCATGGACAACCGTTCCCACATATCCAAGTGGCGTGATTGGTTTTATGCTCTGTTCTACGGAGGGGCCAGCAGTTGATTTCAAGCACCCAGTGAACCCTATTGATAAAGTTGAGGACAGTGCAAACACAAAGCGACCTTTGAAATTTTACAACTCGGAGATCCATGCAGCAGCTTTCTGTTTGCCCTCTTTCGCCAAGAGGATCATCGAGTCAAAAGCTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61604.p1 GENE.R_Transcript_61604~~R_Transcript_61604.p1 ORF type:complete len:352 (+),score=88.55,Spermine_synth|PF01564.13|7e-98,Spermine_synth|PF01564.13|5e+03 R_Transcript_61604:478-1533(+)
MAEESAVISGTDLPVKRPREEEKRENTMSENNNNVNGASKMETDNNTPKENPDSLSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSKYQNVMVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSVEHIDICEIDEMVVTVSKEFFPDVAVGYDDPRVNLHIGDGVAFLKAAPEGSYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNPIDKVEDSANTKRPLKFYNSEIHAAAFCLPSFAKRIIESKAN*

Click here to download the sequence:
Link to NCBI Protein BLAST